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分子复制子的进化生态学

The evolutionary ecology of molecular replicators.

作者信息

Nee Sean

机构信息

The Braithwaite Group , Department of Ecosystem Science & Management, The Pennsylvania State University , University Park, PA 16802 , USA.

出版信息

R Soc Open Sci. 2016 Aug 3;3(8):160235. doi: 10.1098/rsos.160235. eCollection 2016 Aug.

Abstract

By reasonable criteria, life on the Earth consists mainly of molecular replicators. These include viruses, transposons, transpovirons, coviruses and many more, with continuous new discoveries like Sputnik Virophage. Their study is inherently multidisciplinary, spanning microbiology, genetics, immunology and evolutionary theory, and the current view is that taking a unified approach has great power and promise. We support this with a new, unified, model of their evolutionary ecology, using contemporary evolutionary theory coupling the Price equation with game theory, studying the consequences of the molecular replicators' promiscuous use of each others' gene for their natural history and evolutionary ecology. Even at this simple expository level, we can make a firm prediction of a new class of replicators exploiting viruses such as lentiviruses like SIVs, a family which includes HIV: these have been explicitly stated in the primary literature to be non-existent. Closely connected to this departure is the view that multicellular organism immunology is more about the management of chronic infections rather than the elimination of acute ones and new understandings emerging are changing our view of the kind of theatre we ourselves provide for the evolutionary play of molecular replicators. This study adds molecular replicators to bacteria in the emerging field of sociomicrobiology.

摘要

按照合理的标准,地球上的生命主要由分子复制器构成。这些包括病毒、转座子、转病毒、协病毒等等,还有像斯普特尼克病毒噬菌体这样不断涌现的新发现。对它们的研究本质上是多学科的,涵盖微生物学、遗传学、免疫学和进化理论,当前的观点是采用统一的方法具有巨大的力量和前景。我们用一种新的、统一的进化生态学模型来支持这一点,运用当代进化理论将普赖斯方程与博弈论相结合,研究分子复制器相互滥用地使用彼此基因对其自然史和进化生态学的影响。即使在这个简单的阐述层面,我们也能做出一个明确的预测,即会出现一类新的利用病毒(如慢病毒,包括HIV所属的SIV家族)的复制器:这些在原始文献中已明确表明是不存在的。与此背离密切相关的观点是,多细胞生物免疫学更多地是关于慢性感染的管理而非急性感染的消除,并且新出现的认识正在改变我们对自身为分子复制器的进化游戏所提供的那种舞台的看法。这项研究在社会微生物学这个新兴领域中将分子复制器添加到了细菌之中。

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