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AtTERT的串联亲和纯化揭示了植物端粒酶在体内可能的相互作用伙伴。

Tandem affinity purification of AtTERT reveals putative interaction partners of plant telomerase in vivo.

作者信息

Majerská Jana, Schrumpfová Petra Procházková, Dokládal Ladislav, Schořová Šárka, Stejskal Karel, Obořil Michal, Honys David, Kozáková Lucie, Polanská Pavla Sováková, Sýkorová Eva

机构信息

Institute of Biophysics, Academy of Sciences of the Czech Republic, v.v.i., Královopolská 135, CZ-61265, Brno, Czech Republic.

Central European Institute of Technology and Faculty of Science, Masaryk University, Kotlářská 2, CZ-61137, Brno, Czech Republic.

出版信息

Protoplasma. 2017 Jul;254(4):1547-1562. doi: 10.1007/s00709-016-1042-3. Epub 2016 Nov 16.

DOI:10.1007/s00709-016-1042-3
PMID:27853871
Abstract

The life cycle of telomerase involves dynamic and complex interactions between proteins within multiple macromolecular networks. Elucidation of these associations is a key to understanding the regulation of telomerase under diverse physiological and pathological conditions from telomerase biogenesis, through telomere recruitment and elongation, to its non-canonical activities outside of telomeres. We used tandem affinity purification coupled to mass spectrometry to build an interactome of the telomerase catalytic subunit AtTERT, using Arabidopsis thaliana suspension cultures. We then examined interactions occurring at the AtTERT N-terminus, which is thought to fold into a discrete domain connected to the rest of the molecule via a flexible linker. Bioinformatic analyses revealed that interaction partners of AtTERT have a range of molecular functions, a subset of which is specific to the network around its N-terminus. A significant number of proteins co-purifying with the N-terminal constructs have been implicated in cell cycle and developmental processes, as would be expected of bona fide regulatory interactions and we have confirmed experimentally the direct nature of selected interactions. To examine AtTERT protein-protein interactions from another perspective, we also analysed AtTERT interdomain contacts to test potential dimerization of AtTERT. In total, our results provide an insight into the composition and architecture of the plant telomerase complex and this will aid in delineating molecular mechanisms of telomerase functions.

摘要

端粒酶的生命周期涉及多个大分子网络中蛋白质之间动态且复杂的相互作用。阐明这些关联是理解端粒酶在从生物合成、端粒招募和延长到端粒以外的非规范活动等多种生理和病理条件下调控机制的关键。我们利用串联亲和纯化结合质谱技术,以拟南芥悬浮培养物构建了端粒酶催化亚基AtTERT的相互作用组。然后,我们研究了在AtTERT N端发生的相互作用,该区域被认为折叠成一个离散结构域,通过一个柔性接头与分子的其余部分相连。生物信息学分析表明,AtTERT的相互作用伙伴具有一系列分子功能,其中一部分是其N端周围网络所特有的。大量与N端构建体共纯化的蛋白质参与了细胞周期和发育过程,这正如真正的调控相互作用所预期的那样,并且我们已经通过实验证实了所选相互作用的直接性质。为了从另一个角度研究AtTERT的蛋白质-蛋白质相互作用,我们还分析了AtTERT结构域间的接触,以测试AtTERT潜在的二聚化。总的来说,我们的结果为植物端粒酶复合物的组成和结构提供了见解,这将有助于阐明端粒酶功能的分子机制。

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本文引用的文献

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Plant Cell. 2016 Jan;28(1):87-101. doi: 10.1105/tpc.15.00787. Epub 2015 Dec 31.
2
cDNA Library Screening Identifies Protein Interactors Potentially Involved in Non-Telomeric Roles of Arabidopsis Telomerase.cDNA文库筛选鉴定出可能参与拟南芥端粒酶非端粒功能的蛋白质相互作用因子。
Front Plant Sci. 2015 Nov 12;6:985. doi: 10.3389/fpls.2015.00985. eCollection 2015.
3
Telomere binding protein TRB1 is associated with promoters of translation machinery genes in vivo.
WHIRLIES是多功能DNA结合蛋白,对植物发育和抗逆性有影响。
Front Plant Sci. 2022 Apr 21;13:880423. doi: 10.3389/fpls.2022.880423. eCollection 2022.
4
Interactome of Arabidopsis Thaliana.拟南芥的相互作用组
Plants (Basel). 2022 Jan 27;11(3):350. doi: 10.3390/plants11030350.
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Nucleic Acids Res. 2021 Sep 20;49(16):9496-9507. doi: 10.1093/nar/gkab699.
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