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Identification of horizontally transferred genes in the genus Colletotrichum reveals a steady tempo of bacterial to fungal gene transfer.炭疽菌属中水平转移基因的鉴定揭示了细菌到真菌基因转移的稳定速率。
BMC Genomics. 2015 Jan 2;16(1):2. doi: 10.1186/1471-2164-16-2.
2
Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes.分解代谢基因频繁、独立地从细菌转移到与之形成对比的丝状真核生物中。
Proc Biol Sci. 2014 Aug 22;281(1789):20140848. doi: 10.1098/rspb.2014.0848.
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Pneumocystis pneumonia associated with human immunodeficiency virus.人免疫缺陷病毒相关性肺孢子菌肺炎。
Clin Chest Med. 2013 Jun;34(2):229-41. doi: 10.1016/j.ccm.2013.02.001. Epub 2013 Apr 8.
4
Dihydropteroate synthase mutations in Pneumocystis pneumonia: impact of applying different definitions of prophylaxis, mortality endpoints and mutant in a single cohort.肺炎支原体二氢叶酸合成酶突变:在单队列中应用不同的预防定义、死亡率终点和突变体对肺炎的影响。
Med Mycol. 2013 Aug;51(6):568-75. doi: 10.3109/13693786.2013.770604. Epub 2013 Mar 8.
5
Pneumocystis jirovecii genotype associated with increased death rate of HIV-infected patients with pneumonia.肺孢子菌杰氏肺囊虫基因型与 HIV 感染合并肺炎患者的死亡率增加相关。
Emerg Infect Dis. 2013 Jan;19(1):21-8; quiz 186. doi: 10.3201/eid1901.120140.
6
Low prevalence of Pneumocystis pneumonia (PCP) but high prevalence of pneumocystis dihydropteroate synthase (dhps) gene mutations in HIV-infected persons in Uganda.在乌干达感染 HIV 的人群中,卡氏肺孢子虫肺炎(PCP)的发病率较低,但二氢叶酸还原酶(dhps)基因突变的发病率较高。
PLoS One. 2012;7(11):e49991. doi: 10.1371/journal.pone.0049991. Epub 2012 Nov 16.
7
Molecular diagnosis and detection of Pneumocystis jirovecii DHPS and DHFR genotypes in respiratory specimens from Colombian patients.从哥伦比亚患者的呼吸道标本中检测肺孢子菌 DHPS 和 DHFR 基因型的分子诊断
Diagn Microbiol Infect Dis. 2012 Mar;72(3):204-13. doi: 10.1016/j.diagmicrobio.2011.11.015.
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[Etiology of pneumonia in chilean HIV-infected adult patients].[智利成年HIV感染患者肺炎的病因]
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[Community antibiotic consumption in Chile, 2000-2008].[2000 - 2008年智利社区抗生素消费情况]
Rev Chilena Infectol. 2011 Apr;28(2):107-12. Epub 2011 May 5.
10
Epidemiology and clinical relevance of Pneumocystis jirovecii Frenkel, 1976 dihydropteroate synthase gene mutations.肺孢子菌二氢叶酸合成酶基因突变的流行病学和临床意义。
Parasite. 2010 Sep;17(3):219-32. doi: 10.1051/parasite/2010173219.

智利圣地亚哥首次发作肺孢子菌肺炎患者中耶氏肺孢子菌二氢蝶酸合酶基因突变的高流行率及对甲氧苄啶-磺胺甲恶唑治疗的临床反应

High Prevalence of Pneumocystis jirovecii Dihydropteroate Synthase Gene Mutations in Patients with a First Episode of Pneumocystis Pneumonia in Santiago, Chile, and Clinical Response to Trimethoprim-Sulfamethoxazole Therapy.

作者信息

Ponce Carolina A, Chabé Magali, George Claudio, Cárdenas Alejandra, Durán Luisa, Guerrero Julia, Bustamante Rebeca, Matos Olga, Huang Laurence, Miller Robert F, Vargas Sergio L

机构信息

Programa de Microbiología y Micología, Instituto de Ciencias Biomédicas, Facultad de Medicina, Universidad de Chile, Santiago, Chile.

University Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, U1019-UMR 8204-CIIL-Centre d'Infection et d'Immunité de Lille, Lille, France.

出版信息

Antimicrob Agents Chemother. 2017 Jan 24;61(2). doi: 10.1128/AAC.01290-16. Print 2017 Feb.

DOI:10.1128/AAC.01290-16
PMID:27855071
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5278682/
Abstract

Mutations in the dihydropteroate synthase (DHPS) gene of Pneumocystis jirovecii are associated with the failure of sulfa prophylaxis. They can develop by selection in patients receiving sulfa drugs or be acquired via person-to-person transmission. DHPS mutations raise concern about the decreasing efficacy of sulfa drugs, the main available therapeutic tool for Pneumocystis pneumonia (PCP). The prevalence of Pneumocystis DHPS mutations was examined in Pneumocystis isolates from 56 sulfa-prophylaxis-naive adults with a first episode of PCP from 2002 to 2010 in Santiago, Chile. Their clinical history was reviewed to analyze the effect of these mutations on response to trimethoprim-sulfamethoxazole (TMP-SMX) therapy and outcome. Mutant genotypes occurred in 22 (48%) of 46 HIV-infected patients and in 5 (50%) of 10 HIV-uninfected patients. Compared to patients with a wild-type genotype, those with mutant genotypes were more likely to experience sulfa treatment-limiting adverse reactions and to have a twice-longer duration of mechanical ventilation if mechanically ventilated. Specific genotypes did not associate with death, which occurred in none of the HIV-infected patients and in 50% of the non-HIV-infected patients. Chile has a high prevalence of DHPS mutations, which were presumably acquired through interhuman transmission because patients were not on sulfa prophylaxis. These results contrast with the low prevalence observed in other Latin American countries with similar usage of sulfa drugs, suggesting that additional sources of resistant genotypes may be possible. The twice-longer duration of mechanical ventilation in patients with mutant DHPS genotypes suggests a decreased efficacy of TMP-SMX and warrants collaborative studies to assess the relevance of DHPS mutations and further research to increase therapeutic options for PCP.

摘要

耶氏肺孢子菌二氢蝶酸合酶(DHPS)基因突变与磺胺预防治疗失败相关。这些突变可在接受磺胺类药物治疗的患者中通过选择产生,或通过人际传播获得。DHPS基因突变引发了人们对磺胺类药物疗效下降的担忧,磺胺类药物是目前治疗肺孢子菌肺炎(PCP)的主要可用治疗手段。2002年至2010年期间,在智利圣地亚哥,对56例首次发生PCP且未接受过磺胺预防治疗的成人患者的肺孢子菌分离株进行了耶氏肺孢子菌DHPS基因突变的患病率检测。回顾了他们的临床病史,以分析这些突变对甲氧苄啶-磺胺甲恶唑(TMP-SMX)治疗反应和结局的影响。46例HIV感染患者中有22例(48%)出现突变基因型,10例未感染HIV的患者中有5例(50%)出现突变基因型。与野生型基因型患者相比,突变基因型患者更有可能出现限制磺胺治疗的不良反应,并且如果接受机械通气,机械通气时间会延长两倍。特定基因型与死亡无关,在HIV感染患者中无一例死亡,在未感染HIV的患者中有50%死亡。智利DHPS基因突变的患病率很高,推测是通过人际传播获得的,因为患者未接受磺胺预防治疗。这些结果与其他磺胺类药物使用情况相似的拉丁美洲国家观察到的低患病率形成对比,表明可能存在其他耐药基因型来源。DHPS基因突变型患者机械通气时间延长两倍表明TMP-SMX疗效降低,有必要开展合作研究以评估DHPS基因突变的相关性,并进一步开展研究以增加PCP的治疗选择。