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大规模平行测序在神经肌肉疾病中的诊断应用:迈向综合诊断

Diagnostic use of Massively Parallel Sequencing in Neuromuscular Diseases: Towards an Integrated Diagnosis.

作者信息

Biancalana Valérie, Laporte Jocelyn

机构信息

Faculté de Médecine, Laboratoire de Diagnostic Génétique, Nouvel Hôpital Civil, Strasbourg, France.

Department of Translational Medicine and Neurogenetics, IGBMC, INSERM U964, CNRS UMR7104, University of Strasbourg, Collège de France, Illkirch, France.

出版信息

J Neuromuscul Dis. 2015 Sep 2;2(3):193-203. doi: 10.3233/JND-150092.

Abstract

Massively parallel sequencing is revolutionizing the genetic testing in diagnosis laboratories, replacing gene-by-gene investigations with a "gene panel" strategy. This new approach is particularly promising for the diagnosis of neuromuscular disorders affecting children as well as adults, which is constrained by strong clinical and genetic heterogeneity. While it leads to a strong improvement in molecular diagnosis, this new approach is dramatically changing the whole diagnosis process, establishing new decision trees and requiring integrated strategies between clinicians and laboratories. To have an overview of the implementation and benefit of these novel sequencing strategies for the diagnosis of neuromuscular disorders, we surveyed the current literature on the application of targeted genes panel sequencing, exome sequencing and genome sequencing. We highlight advantages and disadvantages of these different strategies in a diagnosis setting, discuss about unresolved cases, and point potential validation approaches and outcomes of massively parallel sequencing. It appears important to integrate such novel strategies with clinical, histopathological and imaging investigations, for a faster and more accurate diagnosis and patient care, and to foster research projects and clinical trials.

摘要

大规模平行测序正在彻底改变诊断实验室中的基因检测,用“基因组合”策略取代逐个基因的研究。这种新方法对于诊断影响儿童和成人的神经肌肉疾病特别有前景,这类疾病受到强烈的临床和遗传异质性的限制。虽然它极大地改善了分子诊断,但这种新方法正在显著改变整个诊断过程,建立新的决策树,并要求临床医生和实验室之间采取综合策略。为了全面了解这些新型测序策略在神经肌肉疾病诊断中的实施情况和益处,我们调查了当前关于靶向基因组合测序、外显子组测序和基因组测序应用的文献。我们强调这些不同策略在诊断环境中的优缺点,讨论未解决的病例,并指出大规模平行测序的潜在验证方法和结果。将这些新型策略与临床、组织病理学和影像学检查相结合,对于更快、更准确的诊断和患者护理,以及促进研究项目和临床试验似乎很重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d050/5240547/75e224182ca8/jnd-2-3-jnd150092-g001.jpg

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