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来自解凝胶芽孢杆菌B-6的双功能木聚糖酶/β-葡聚糖酶Xyn10E的22家族碳水化合物结合模块在木质纤维素降解中起重要作用。

The family 22 carbohydrate-binding module of bifunctional xylanase/β-glucanase Xyn10E from Paenibacillus curdlanolyticus B-6 has an important role in lignocellulose degradation.

作者信息

Sermsathanaswadi Junjarus, Baramee Sirilak, Tachaapaikoon Chakrit, Pason Patthra, Ratanakhanokchai Khanok, Kosugi Akihiko

机构信息

Department of Chemical Technology, Faculty of Science and Technology, Suan Dusit University, 295 Rajasrima Road, Dusit, Bangkok 10300, Thailand; Biological Resources and Post-harvest Division, Japan International Research Center for Agricultural Sciences (JIRCAS), 1-1 Ohwashi, Tsukuba, Ibaraki 305-8686, Japan.

School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkuntien, Bangkok 10150, Thailand.

出版信息

Enzyme Microb Technol. 2017 Jan;96:75-84. doi: 10.1016/j.enzmictec.2016.09.015. Epub 2016 Sep 26.

Abstract

A newly isolated endo-β-1,4-xylanase (Xyn10E) from Paenibacillus curdlanolyticus B-6 has a modular structure consisting of a family 22 carbohydrate-binding module (CBM), a glycoside hydrolase (GH) family 10 catalytic domain, two fibronectin type III (Fn3) domains, and a family 3 CBM at the C-terminus. Intact Xyn10E (rXyn10E), CBM22-deleted Xyn10E (X-CBM3), CBM3-deleted Xyn10E (X-CBM22), and GH10 catalytic domain only (X-GH10) were expressed in Escherichia coli. rXyn10E showed bifunctional degradation activity toward xylan and β-glucan and also degraded microcrystalline cellulose. Although X-CBM3 and X-GH10 had drastically reduced xylanase and β-glucanase activities, X-CBM22 mostly retained these activities. Similar K values were obtained for rXyn10E and X-CBM3, but k and k/K values for X-CBM3 and X-GH10 were lower than those for rXyn10E, suggesting that CBM22 of Xyn10E may contribute to catalytic efficiency. In binding assays, X-CBM3 was still able to bind to β-glucan, soluble xylan, insoluble xylan, and cellulose through GH10 and CBM3. These results indicate that CBM22 has an important role not only in binding to xylan and β-glucan but also in feeding both polysaccharides into the neighboring GH10 catalytic domain. rXyn10E showed remarkable synergism with rXyn11A, a major xylanase subunit of P. curdlanolyticus B-6, in the degradation of untreated corn stover and sugarcane bagasse; however, the combination of X-CBM3 and rXyn11A was not synergistic. These results indicate that Xyn10E and Xyn11A act synergistically on lignocellulosic biomass, and CBM22 is essential for efficient degradation of lignocellulosic materials.

摘要

从解凝胶芽孢杆菌B-6新分离出的一种内切-β-1,4-木聚糖酶(Xyn10E)具有模块化结构,由一个22家族碳水化合物结合模块(CBM)、一个糖苷水解酶(GH)10家族催化结构域、两个纤连蛋白III型(Fn3)结构域和一个位于C端的3家族CBM组成。完整的Xyn10E(rXyn10E)、缺失CBM22的Xyn10E(X-CBM3)、缺失CBM3的Xyn10E(X-CBM22)以及仅含GH10催化结构域的Xyn10E(X-GH10)在大肠杆菌中表达。rXyn10E对木聚糖和β-葡聚糖具有双功能降解活性,还能降解微晶纤维素。虽然X-CBM3和X-GH10的木聚糖酶和β-葡聚糖酶活性大幅降低,但X-CBM22大多保留了这些活性。rXyn10E和X-CBM3获得了相似的K值,但X-CBM3和X-GH10的k和k/K值低于rXyn10E,这表明Xyn10E的CBM22可能有助于提高催化效率。在结合试验中,X-CBM3仍能够通过GH10和CBM3与β-葡聚糖、可溶性木聚糖、不溶性木聚糖和纤维素结合。这些结果表明,CBM22不仅在与木聚糖和β-葡聚糖结合中起重要作用,而且在将两种多糖输送到相邻的GH10催化结构域中也起重要作用。rXyn10E在降解未处理的玉米秸秆和甘蔗渣时,与解凝胶芽孢杆菌B-6的主要木聚糖酶亚基rXyn11A表现出显著的协同作用;然而,X-CBM3和rXyn11A的组合没有协同作用。这些结果表明,Xyn10E和Xyn11A对木质纤维素生物质具有协同作用,且CBM22对于木质纤维素材料的高效降解至关重要。

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