• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

工程化改造哺乳动物细胞工厂以提高蛋白质产量:长链非编码SINEUP RNA的意外用途

Engineering Translation in Mammalian Cell Factories to Increase Protein Yield: The Unexpected Use of Long Non-Coding SINEUP RNAs.

作者信息

Zucchelli Silvia, Patrucco Laura, Persichetti Francesca, Gustincich Stefano, Cotella Diego

机构信息

Department of Health Sciences, Università del Piemonte Orientale, Novara, Italy; Area of Neuroscience, SISSA, Trieste, Italy.

Department of Health Sciences, Università del Piemonte Orientale, Novara, Italy.

出版信息

Comput Struct Biotechnol J. 2016 Oct 27;14:404-410. doi: 10.1016/j.csbj.2016.10.004. eCollection 2016.

DOI:10.1016/j.csbj.2016.10.004
PMID:27872686
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5107644/
Abstract

Mammalian cells are an indispensable tool for the production of recombinant proteins in contexts where function depends on post-translational modifications. Among them, Chinese Hamster Ovary (CHO) cells are the primary factories for the production of therapeutic proteins, including monoclonal antibodies (MAbs). To improve expression and stability, several methodologies have been adopted, including methods based on media formulation, selective pressure and cell- or vector engineering. This review presents current approaches aimed at improving mammalian cell factories that are based on the enhancement of translation. Among well-established techniques (codon optimization and improvement of mRNA secondary structure), we describe SINEUPs, a family of antisense long non-coding RNAs that are able to increase translation of partially overlapping protein-coding mRNAs. By exploiting their modular structure, SINEUP molecules can be designed to target virtually any mRNA of interest, and thus to increase the production of secreted proteins. Thus, synthetic SINEUPs represent a new versatile tool to improve the production of secreted proteins in biomanufacturing processes.

摘要

在功能依赖于翻译后修饰的情况下,哺乳动物细胞是生产重组蛋白不可或缺的工具。其中,中国仓鼠卵巢(CHO)细胞是生产治疗性蛋白(包括单克隆抗体)的主要工厂。为了提高表达和稳定性,人们采用了多种方法,包括基于培养基配方、选择压力以及细胞或载体工程的方法。本综述介绍了当前旨在通过增强翻译来改进哺乳动物细胞工厂的方法。在成熟的技术(密码子优化和mRNA二级结构改善)中,我们描述了SINEUPs,这是一类反义长链非编码RNA,能够增加部分重叠的蛋白质编码mRNA的翻译。通过利用其模块化结构,SINEUP分子可以被设计成靶向几乎任何感兴趣的mRNA,从而增加分泌蛋白的产量。因此,合成SINEUPs是一种新型通用工具,可用于提高生物制造过程中分泌蛋白的产量。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/d72451b513f7/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/404233b298dd/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/1b51ac6e58be/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/d72451b513f7/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/404233b298dd/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/1b51ac6e58be/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0999/5107644/d72451b513f7/gr3.jpg

相似文献

1
Engineering Translation in Mammalian Cell Factories to Increase Protein Yield: The Unexpected Use of Long Non-Coding SINEUP RNAs.工程化改造哺乳动物细胞工厂以提高蛋白质产量:长链非编码SINEUP RNA的意外用途
Comput Struct Biotechnol J. 2016 Oct 27;14:404-410. doi: 10.1016/j.csbj.2016.10.004. eCollection 2016.
2
Engineering mammalian cell factories with SINEUP noncoding RNAs to improve translation of secreted proteins.利用SINEUP非编码RNA构建哺乳动物细胞工厂以提高分泌蛋白的翻译水平。
Gene. 2015 Sep 15;569(2):287-93. doi: 10.1016/j.gene.2015.05.070. Epub 2015 Jun 2.
3
Cell Based Assays of SINEUP Non-coding RNAs That Can Specifically Enhance mRNA Translation.基于细胞的SINEUP非编码RNA检测方法,该方法可特异性增强mRNA翻译。
J Vis Exp. 2019 Feb 1(144). doi: 10.3791/58627.
4
Improving the expression of anti-IL-2Rα monoclonal antibody in the CHO cells through optimization of the expression vector and translation efficiency.通过优化表达载体和翻译效率提高抗 IL-2Rα 单克隆抗体在 CHO 细胞中的表达。
J Biotechnol. 2020 Dec 20;324:112-120. doi: 10.1016/j.jbiotec.2020.09.006. Epub 2020 Sep 29.
5
SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells.SINEUPs是模块化反义长链非编码RNA,可增加细胞中靶蛋白的合成。
Front Cell Neurosci. 2015 May 13;9:174. doi: 10.3389/fncel.2015.00174. eCollection 2015.
6
Design and Delivery of SINEUP: A New Modular Tool to Increase Protein Translation.SINEUP 的设计与实现:一种提高蛋白质翻译的新型模块化工具。
Methods Mol Biol. 2022;2434:63-87. doi: 10.1007/978-1-0716-2010-6_4.
7
A long non-coding SINEUP RNA boosts semi-stable production of fully human monoclonal antibodies in HEK293E cells.长非编码 SINEUP RNA 促进 HEK293E 细胞中完全人源单克隆抗体的半稳定生产。
MAbs. 2018 Jul;10(5):730-737. doi: 10.1080/19420862.2018.1463945. Epub 2018 May 10.
8
SINEUPs: A new class of natural and synthetic antisense long non-coding RNAs that activate translation.SINEUPs:一类可激活翻译的新型天然和合成反义长链非编码RNA。
RNA Biol. 2015;12(8):771-9. doi: 10.1080/15476286.2015.1060395.
9
Identification of functional features of synthetic SINEUPs, antisense lncRNAs that specifically enhance protein translation.合成SINEUPs(即特异性增强蛋白质翻译的反义长链非编码RNA)功能特性的鉴定。
PLoS One. 2018 Feb 7;13(2):e0183229. doi: 10.1371/journal.pone.0183229. eCollection 2018.
10
SINEUP non-coding RNA activity depends on specific N6-methyladenosine nucleotides.SINEUP非编码RNA的活性取决于特定的N6-甲基腺苷核苷酸。
Mol Ther Nucleic Acids. 2023 Apr 7;32:402-414. doi: 10.1016/j.omtn.2023.04.002. eCollection 2023 Jun 13.

引用本文的文献

1
SINEUP RNA rescues molecular phenotypes associated with CHD8 suppression in autism spectrum disorder model systems.SINEUP RNA可挽救自闭症谱系障碍模型系统中与CHD8抑制相关的分子表型。
Mol Ther. 2025 Mar 5;33(3):1180-1196. doi: 10.1016/j.ymthe.2024.12.043. Epub 2024 Dec 30.
2
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein).通过癌蛋白 YAP(Yes 相关蛋白)提高 CHO-K1 细胞的生产力和增殖能力。
Appl Microbiol Biotechnol. 2024 Apr 4;108(1):285. doi: 10.1007/s00253-024-13122-5.
3
Employing active learning in the optimization of culture medium for mammalian cells.

本文引用的文献

1
Engineering antibody therapeutics.工程抗体疗法。
Curr Opin Struct Biol. 2016 Jun;38:163-73. doi: 10.1016/j.sbi.2016.07.012. Epub 2016 Aug 12.
2
Translational control by 5'-untranslated regions of eukaryotic mRNAs.真核生物 mRNAs 5'-非翻译区的翻译调控。
Science. 2016 Jun 17;352(6292):1413-6. doi: 10.1126/science.aad9868.
3
Discovery and Optimization of Small Molecule Splicing Modifiers of Survival Motor Neuron 2 as a Treatment for Spinal Muscular Atrophy.发现并优化作为脊髓性肌萎缩症治疗方法的生存运动神经元2小分子剪接调节剂
采用主动学习优化哺乳动物细胞的培养基。
NPJ Syst Biol Appl. 2023 May 30;9(1):20. doi: 10.1038/s41540-023-00284-7.
4
Cell factory engineering: Challenges and opportunities for synthetic biology applications.细胞工厂工程:合成生物学应用的挑战与机遇。
Biotechnol Bioeng. 2023 Sep;120(9):2441-2459. doi: 10.1002/bit.28365. Epub 2023 Mar 11.
5
Development of a stable antibody production system utilizing an Hspa5 promoter in CHO cells.利用 CHO 细胞中的 Hspa5 启动子开发稳定的抗体生产系统。
Sci Rep. 2022 May 24;12(1):7239. doi: 10.1038/s41598-022-11342-1.
6
High-Throughput Monoclonal Antibody Discovery from Phage Libraries: Challenging the Current Preclinical Pipeline to Keep the Pace with the Increasing mAb Demand.从噬菌体文库中进行高通量单克隆抗体发现:挑战当前临床前流程以跟上单克隆抗体需求的增长步伐。
Cancers (Basel). 2022 Mar 4;14(5):1325. doi: 10.3390/cancers14051325.
7
Design and Delivery of SINEUP: A New Modular Tool to Increase Protein Translation.SINEUP 的设计与实现:一种提高蛋白质翻译的新型模块化工具。
Methods Mol Biol. 2022;2434:63-87. doi: 10.1007/978-1-0716-2010-6_4.
8
Over-Production of Therapeutic Growth Factors for Articular Cartilage Regeneration by Protein Production Platforms and Protein Packaging Cell Lines.通过蛋白质生产平台和蛋白质包装细胞系过量生产用于关节软骨再生的治疗性生长因子
Biology (Basel). 2020 Oct 9;9(10):330. doi: 10.3390/biology9100330.
9
Defining lncRNAs Correlated with CHO Cell Growth and IgG Productivity by RNA-Seq.通过RNA测序确定与中国仓鼠卵巢细胞生长和IgG生产力相关的长链非编码RNA
iScience. 2020 Jan 24;23(1):100785. doi: 10.1016/j.isci.2019.100785. Epub 2019 Dec 18.
10
Cell and Gene Therapy for Spine Regeneration: Mammalian Protein Production Platforms for Overproduction of Therapeutic Proteins and Growth Factors.用于脊柱再生的细胞和基因治疗:用于治疗性蛋白和生长因子的过量生产的哺乳动物蛋白生产平台。
Neurosurg Clin N Am. 2020 Jan;31(1):131-139. doi: 10.1016/j.nec.2019.08.015.
J Med Chem. 2016 Jul 14;59(13):6070-85. doi: 10.1021/acs.jmedchem.6b00460. Epub 2016 Jul 6.
4
Synthetic long non-coding RNAs [SINEUPs] rescue defective gene expression in vivo.合成长链非编码RNA【SINEUPs】可在体内挽救缺陷基因表达。
Sci Rep. 2016 Jun 6;6:27315. doi: 10.1038/srep27315.
5
Design of structurally distinct proteins using strategies inspired by evolution.利用受进化启发的策略设计结构不同的蛋白质。
Science. 2016 May 6;352(6286):687-90. doi: 10.1126/science.aad8036.
6
Synthetic biology to access and expand nature's chemical diversity.合成生物学用于获取并拓展自然界的化学多样性。
Nat Rev Microbiol. 2016 Mar;14(3):135-49. doi: 10.1038/nrmicro.2015.24.
7
Mechanisms underlying epigenetic and transcriptional heterogeneity in Chinese hamster ovary (CHO) cell lines.中国仓鼠卵巢(CHO)细胞系中表观遗传和转录异质性的潜在机制。
BMC Biotechnol. 2016 Jan 22;16:6. doi: 10.1186/s12896-016-0238-0.
8
Integrating gene synthesis and microfluidic protein analysis for rapid protein engineering.整合基因合成与微流控蛋白质分析以实现快速蛋白质工程。
Nucleic Acids Res. 2016 Apr 20;44(7):e68. doi: 10.1093/nar/gkv1497. Epub 2015 Dec 23.
9
Cap-dependent, scanning-free translation initiation mechanisms.帽依赖性、无扫描翻译起始机制。
Biochim Biophys Acta. 2015 Nov;1849(11):1313-8. doi: 10.1016/j.bbagrm.2015.09.006. Epub 2015 Sep 14.
10
Codon Usage Influences the Local Rate of Translation Elongation to Regulate Co-translational Protein Folding.密码子使用影响翻译延伸的局部速率以调控共翻译蛋白质折叠。
Mol Cell. 2015 Sep 3;59(5):744-54. doi: 10.1016/j.molcel.2015.07.018. Epub 2015 Aug 27.