Lin Xi, Liu Sha, Xie Guangrong, Chen Jing, Li Penghua, Chen Jianhua
School of Life Science and Technology, China Pharmaceutical University, Nanjing 210009, China.
J Microbiol Biotechnol. 2016 Nov 28;26(11):1908-1917. doi: 10.4014/jmb.1604.04019.
Wild strain L-6 was subjected to combined mutagenesis, including UV irradiation, atmospheric and room temperature plasma, and ion beam implantation, to increase the yield of 1,3-dihydroxyacetone (DHA). With application of a high-throughput screening method, mutant I-2-239 with a DHA productivity of 103.5 g/l in flask-shake fermentation was finally obtained with the starting glycerol concentration of 120 g/l, which was 115.7% higher than the wild strain. The cultivation time also decreased from 54 h to 36 h. Compared with the wild strain, a dramatic increase in enzyme activity was observed for the mutant strain, although the increase in biomass was limited. DNA and amino acid sequence alignment revealed 11 nucleotide substitutions and 10 amino acid substitutions between the of strains L-6 and I-2-239. Simulation of the 3-D structure and prediction of active site residues and PQQ binding site residues suggested that these mutations were mainly related to PQQ binding, which was speculated to be favorable for the catalyzing capacity of glycerol dehydrogenase. RT-qPCR assay indicated that the transcription levels of and in the mutant strain were respectively 4.8-fold and 5.4-fold higher than that in the wild strain, suggesting another possible reason for the increased DHA productivity of the mutant strain.
野生菌株L-6接受了包括紫外线照射、常压室温等离子体和离子束注入在内的复合诱变,以提高1,3-二羟基丙酮(DHA)的产量。通过应用高通量筛选方法,最终获得了突变体I-2-239,在摇瓶发酵中,以120 g/l的起始甘油浓度,DHA产量为103.5 g/l,比野生菌株高115.7%。培养时间也从54小时缩短至36小时。与野生菌株相比,突变菌株的酶活性显著增加,尽管生物量的增加有限。DNA和氨基酸序列比对显示,菌株L-6和I-2-239之间有11个核苷酸替换和10个氨基酸替换。三维结构模拟以及活性位点残基和PQQ结合位点残基的预测表明,这些突变主要与PQQ结合有关,推测这有利于甘油脱氢酶的催化能力。RT-qPCR分析表明,突变菌株中[相关基因]的转录水平分别比野生菌株高4.8倍和5.4倍,这表明了突变菌株DHA产量增加的另一个可能原因。