Norman Jeffrey S, Friesen Maren L
Department of Plant Biology, Michigan State University, East Lansing, MI, USA.
ISME J. 2017 Feb;11(2):315-326. doi: 10.1038/ismej.2016.127. Epub 2016 Nov 29.
Terrestrial systems support a variety of free-living soil diazotrophs, which can fix nitrogen (N) outside of plant associations. However, owing to the metabolic costs associated with N fixation, free-living soil diazotrophs likely rely on soil N to satisfy the majority of cellular N demand and only fix atmospheric N under certain conditions. Culture-based studies and genomic data show that many free-living soil diazotrophs can access high-molecular weight organic soil N by releasing N-acquiring enzymes such as proteases and chitinases into the extracellular environment. Here, we formally propose a N acquisition strategy used by free-living diazotrophs that accounts for high-molecular weight N acquisition through exoenzyme release by these organisms. We call this the 'LAH N-acquisition strategy' for the preferred order of N pools used once inorganic soil N is limiting: (1) low-molecular weight organic N, (2) atmospheric N and (3) high-molecular weight organic N. In this framework, free-living diazotrophs primarily use biological N fixation (BNF) as a short-term N acquisition strategy to offset the cellular N lost in exoenzyme excretion as low-molecular weight N becomes limiting. By accounting for exoenzyme release by free-living diazotrophs within a cost-benefit framework, investigation of the LAH N acquisition strategy will contribute to a process-level understanding of BNF in soil environments.
陆地系统支持多种自由生活的土壤固氮微生物,它们能够在不与植物共生的情况下固定氮(N)。然而,由于与固氮相关的代谢成本,自由生活的土壤固氮微生物可能依赖土壤氮来满足大部分细胞氮需求,并且仅在特定条件下固定大气中的氮。基于培养的研究和基因组数据表明,许多自由生活的土壤固氮微生物可以通过向细胞外环境释放蛋白酶和几丁质酶等获取氮的酶来获取高分子量有机土壤氮。在此,我们正式提出一种自由生活固氮微生物所采用的氮获取策略,该策略考虑了这些生物通过释放胞外酶获取高分子量氮的过程。我们将此称为“LAH氮获取策略”,用于描述一旦无机土壤氮受限,氮库使用的优先顺序:(1)低分子量有机氮,(2)大气氮,(3)高分子量有机氮。在此框架下,当低分子量氮变得有限时,自由生活的固氮微生物主要将生物固氮(BNF)作为一种短期氮获取策略,以抵消因胞外酶排泄而损失的细胞氮。通过在成本效益框架内考虑自由生活固氮微生物释放的胞外酶,对LAH氮获取策略的研究将有助于从过程层面理解土壤环境中的生物固氮。