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基于 TCGA 数据的结肠癌患者生存预后的四个 microRNAs 标志物。

Four microRNAs Signature for Survival Prognosis in Colon Cancer using TCGA Data.

机构信息

Department of Colorectal Surgery, Cancer Hospital of China Medical University, Liaoning Cancer Hospital &Institute, Shenyang, People's Republic of China.

出版信息

Sci Rep. 2016 Dec 15;6:38306. doi: 10.1038/srep38306.

Abstract

This study aims to develop microRNA expression signature for colon cancer survival prognosis based on the Cancer Genomic Common database. miRNAs levels between colon cancer and non-cancer tissues were screened by t-test (p < 0.05). Kaplan-Meier survival method was used to discriminate survival significant miRNAs, followed by miRNAs index accumulation to power the miRNAs-survival reliability. In the end, we test the selected miRNAs in HT126 colon cancer cells to validate its anti-cancer effect. The study identified a 84-miRNAs signature. Of the above 84 miRNAs, we got four miRNAs which were survival associated by using ROC curve method and Kaplan-Meier survival method (p < 0.001). The result showed that low risk group had quite a low death rate, the survival rate was over 80%. The high risk group had survival rate lower than 20%, which was also extremely lower than the overall survival rate. In the HT126 cells study, cell growth assay showed miR-130a sponge inhibited colon cancer cells growth and sensitized the anti-cancer drug effect of 5-FU to blocked cancer cell growth. We developed a prognostic 4-microRNA expression signature for colon cancer patient survival, and validated miR-130a sponge could sensitized 5-FU anti-cancer effect.

摘要

本研究旨在基于癌症基因组公共数据库开发用于结肠癌生存预后的 microRNA 表达特征。通过 t 检验(p<0.05)筛选结肠癌与非癌组织之间的 microRNA 水平。使用 Kaplan-Meier 生存方法区分具有生存意义的 microRNAs,然后通过 microRNA 指数积累来增强 microRNA 生存的可靠性。最后,我们在 HT126 结肠癌细胞中测试了选定的 microRNAs,以验证其抗癌作用。该研究确定了一个由 84 个 microRNAs 组成的特征。在上述 84 个 microRNAs 中,我们使用 ROC 曲线法和 Kaplan-Meier 生存法确定了四个与生存相关的 microRNAs(p<0.001)。结果表明,低风险组的死亡率相当低,生存率超过 80%。高风险组的生存率低于 20%,也远低于总体生存率。在 HT126 细胞研究中,细胞生长测定表明 miR-130a 海绵抑制结肠癌细胞生长,并增强了 5-FU 的抗癌作用,从而阻断了癌细胞的生长。我们开发了一种用于结肠癌患者生存的预后 4 个 microRNA 表达特征,并验证了 miR-130a 海绵可以增强 5-FU 的抗癌作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0394/5156922/1afa7ebef675/srep38306-f1.jpg

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