Lal Jyotsana, Maccarini Marco, Fouquet Peter, Ho Nancy T, Ho Chien, Makowski Lee
Biosciences Division, Argonne National Laboratory, Argonne, Illinois, 60439.
Institut Laue-Langevin, CS 20156, 38042 Grenoble Cedex 9, France.
Protein Sci. 2017 Mar;26(3):505-514. doi: 10.1002/pro.3099. Epub 2017 Feb 14.
Hemoglobin (Hb) is an extensively studied paradigm of proteins that alter their function in response to allosteric effectors. Models of its action have been used as prototypes for structure-function relationships in many proteins, and models for the molecular basis of its function have been deeply studied and extensively argued. Recent reports suggest that dynamics may play an important role in its function. Relatively little is known about the slow, correlated motions of hemoglobin subunits in various structural states because experimental and computational strategies for their characterization are challenging. Allosteric effectors such as inositol hexaphosphate (IHP) bind to both deoxy-Hb and HbCO, albeit at different sites, leading to a lowered oxygen affinity. The manner in which these effectors impact oxygen binding is unclear and may involve changes in structure, dynamics or both. Here we use neutron spin echo measurements accompanied by wide-angle X-ray scattering to show that binding of IHP to HbCO results in an increase in the rate of coordinated motions of Hb subunits relative to one another with little if any change in large scale structure. This increase of large-scale dynamics seems to be coupled with a decrease in the average magnitude of higher frequency modes of individual residues. These observations indicate that enhanced dynamic motions contribute to the functional changes induced by IHP and suggest that they may be responsible for the lowered oxygen affinity triggered by these effectors.
血红蛋白(Hb)是一种被广泛研究的蛋白质范例,它会根据变构效应剂改变其功能。其作用模型已被用作许多蛋白质结构 - 功能关系的原型,并且其功能分子基础的模型也得到了深入研究和广泛讨论。最近的报道表明,动力学可能在其功能中起重要作用。由于表征血红蛋白亚基在各种结构状态下缓慢且相关运动的实验和计算策略具有挑战性,因此对其了解相对较少。变构效应剂,如肌醇六磷酸(IHP),尽管结合位点不同,但会与脱氧血红蛋白和一氧化碳血红蛋白(HbCO)都结合,导致氧亲和力降低。这些效应剂影响氧结合的方式尚不清楚,可能涉及结构、动力学或两者的变化。在这里,我们使用中子自旋回波测量并结合广角X射线散射来表明,IHP与HbCO的结合导致Hb亚基之间协同运动速率增加,而大规模结构几乎没有变化(如果有变化也很小)。这种大规模动力学的增加似乎与单个残基高频模式平均幅度的降低相关。这些观察结果表明,增强的动态运动有助于IHP诱导的功能变化,并表明它们可能是这些效应剂引发氧亲和力降低的原因。