Department of Electrical and Computer Engineering, Northeastern University, 360 Huntington Avenue, Boston, MA 02115, USA.
J Mol Biol. 2011 May 20;408(5):909-21. doi: 10.1016/j.jmb.2011.02.062. Epub 2011 Mar 21.
Specific ligation states of hemoglobin are, when crystallized, capable of taking on multiple quaternary structures. The relationship between these structures, captured in crystal lattices, and hemoglobin structure in solution remains uncertain. Wide-angle X-ray solution scattering (WAXS) is a sensitive probe of protein structure in solution that can distinguish among similar structures and has the potential to contribute to these issues. We used WAXS to assess the relationships among the structures of human and bovine hemoglobins in different liganded forms in solution. WAXS data readily distinguished among the various forms of hemoglobins. WAXS patterns confirm some of the relationships among hemoglobin structures that have been defined through crystallography and NMR and extend others. For instance, methemoglobin A in solution is, as expected, nearly indistinguishable from HbCO A. Interestingly, for bovine hemoglobin, the differences between deoxy-Hb, methemoglobin and HbCO are smaller than the corresponding differences in human hemoglobin. WAXS data were also used to assess the spatial extent of structural fluctuations of various hemoglobins in solution. Dynamics has been implicated in allosteric control of hemoglobin, and increased dynamics has been associated with lowered oxygen affinity. Consistent with that notion, WAXS patterns indicate that deoxy-Hb A exhibits substantially larger structural fluctuations than HbCO A. Comparisons between the observed WAXS patterns and those predicted on the basis of atomic coordinate sets suggest that the structures of Hb in different liganded forms exhibit clear differences from known crystal structures.
血红蛋白的特定键合状态在结晶时能够呈现多种四级结构。这些结构与血红蛋白在溶液中的结构之间的关系在晶体晶格中被捕获,但仍然不确定。广角 X 射线溶液散射(WAXS)是一种对溶液中蛋白质结构敏感的探针,可以区分相似的结构,并有可能为解决这些问题做出贡献。我们使用 WAXS 来评估不同配位形式的人血红蛋白和牛血红蛋白在溶液中的结构之间的关系。WAXS 数据可以轻松地区分各种形式的血红蛋白。WAXS 图谱证实了一些通过晶体学和 NMR 定义的血红蛋白结构之间的关系,并扩展了其他关系。例如,溶液中的高铁血红蛋白 A 几乎与 HbCO A 无法区分。有趣的是,对于牛血红蛋白,脱氧-Hb、高铁血红蛋白和 HbCO 之间的差异小于人血红蛋白中的相应差异。WAXS 数据还用于评估各种血红蛋白在溶液中的结构波动的空间范围。动力学已被牵连到血红蛋白的变构控制中,并且动力学的增加与降低的氧亲和力有关。与该观点一致,WAXS 图谱表明脱氧-Hb A 表现出比 HbCO A 大得多的结构波动。观察到的 WAXS 图谱与基于原子坐标集预测的图谱之间的比较表明,不同配位形式的 Hb 结构与已知晶体结构存在明显差异。