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CRISPR/Cas9 功能筛选鉴定罕见肿瘤抑制因子

A CRISPR/Cas9 Functional Screen Identifies Rare Tumor Suppressors.

机构信息

Department of Biochemistry, McIntyre Medical Sciences Building, McGill University, Montreal, Québec, H3G 1Y6, Canada.

Institute for Cancer Genetics, Columbia University Medical Center, 1130 St Nicholas Ave, New York, NY 10032, USA.

出版信息

Sci Rep. 2016 Dec 16;6:38968. doi: 10.1038/srep38968.

Abstract

An enormous amount of tumor sequencing data has been generated through large scale sequencing efforts. The functional consequences of the majority of mutations identified by such projects remain an open, unexplored question. This problem is particularly complicated in the case of rare mutations where frequency of occurrence alone or prediction of functional consequences are insufficient to distinguish driver from passenger or bystander mutations. We combine genome editing technology with a powerful mouse cancer model to uncover previously unsuspected rare oncogenic mutations in Burkitt's lymphoma. We identify two candidate tumor suppressors whose loss cooperate with MYC over-expression to accelerate lymphomagenesis. Our results highlight the utility of in vivo CRISPR/Cas9 screens combined with powerful mouse models to identify and validate rare oncogenic modifier events from tumor mutational data.

摘要

通过大规模测序工作已经产生了大量的肿瘤测序数据。这些项目所鉴定的大多数突变的功能后果仍然是一个悬而未决的、未被探索的问题。在罕见突变的情况下,这个问题尤其复杂,仅发生频率或功能后果的预测不足以区分驱动突变和乘客突变或旁观者突变。我们将基因组编辑技术与强大的小鼠癌症模型相结合,以揭示 Burkitt 淋巴瘤中以前未被怀疑的罕见致癌突变。我们鉴定了两个候选肿瘤抑制因子,它们的缺失与 MYC 过表达协同作用,加速了淋巴瘤的发生。我们的研究结果强调了利用体内 CRISPR/Cas9 筛选与强大的小鼠模型相结合,从肿瘤突变数据中识别和验证罕见致癌修饰事件的有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92ac/5159885/4282f6a0e908/srep38968-f1.jpg

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