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MCR-1 催化结构域的高分辨率晶体结构。

High resolution crystal structure of the catalytic domain of MCR-1.

机构信息

Department of Biology and Shenzhen Key Laboratory of Cell Microenvironment, Southern University of Science and Technology, Shenzhen 518055, China.

出版信息

Sci Rep. 2016 Dec 21;6:39540. doi: 10.1038/srep39540.

Abstract

The newly identified mobile colistin resistant gene (mcr-1) rapidly spread among different bacterial strains and confers colistin resistance to its host, which has become a global concern. Based on sequence alignment, MCR-1 should be a phosphoethanolamine transferase, members of the YhjW/YjdB/YijP superfamily and catalyze the addition of phosphoethanolamine to lipid A, which needs to be validated experimentally. Here we report the first high-resolution crystal structure of the C-terminal catalytic domain of MCR-1 (MCR-1C) in its native state. The active pocket of native MCR-1C depicts unphosphorylated nucleophilic residue Thr285 in coordination with two Zinc ions and water molecules. A flexible adjacent active site loop (aa: Lys348-365) pose an open conformation compared to its structural homologues, suggesting of an open substrate entry channel. Taken together, this structure sets ground for further study of substrate binding and MCR-1 catalytic mechanism in development of potential therapeutic agents.

摘要

新鉴定的可移动多粘菌素耐药基因(mcr-1)在不同细菌菌株中迅速传播,并使宿主对多粘菌素产生耐药性,这已引起全球关注。根据序列比对,MCR-1 应该是一种磷酸乙醇胺转移酶,属于 YhjW/YjdB/YijP 超家族的成员,能够催化将磷酸乙醇胺添加到脂质 A 上,这需要通过实验来验证。在这里,我们报告了 MCR-1(MCR-1C)在其天然状态下的 C 末端催化结构域的首个高分辨率晶体结构。天然 MCR-1C 的活性口袋描绘了与两个锌离子和水分子配位的未磷酸化亲核残基 Thr285。与结构同源物相比,相邻的灵活活性位点环(aa:Lys348-365)呈现出开放构象,表明存在开放的底物进入通道。总之,该结构为进一步研究潜在治疗剂的底物结合和 MCR-1 催化机制奠定了基础。

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