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在没有酶的情况下,通过特定的氨基酸和核苷酸促进肽的形成。

Amino Acid-Specific, Ribonucleotide-Promoted Peptide Formation in the Absence of Enzymes.

机构信息

Institut für Organische Chemie, Universität Stuttgart, 70569, Stuttgart, Germany.

出版信息

Angew Chem Int Ed Engl. 2017 Jan 24;56(5):1224-1228. doi: 10.1002/anie.201610651. Epub 2016 Dec 21.

Abstract

Nucleic acids and polypeptides are at the heart of life. It is interesting to ask whether the monomers of these biopolymers possess intrinsic reactivity that favors oligomerization in the absence of enzymes. We have recently observed that covalently linked peptido RNA chains form when mixtures of monomers react in salt-rich condensation buffer. Here, we report the results of a screen of the 20 proteinogenic amino acids and four ribonucleotides. None of the amino acids prevent phosphodiester formation, so all of them are compatible with genetic encoding through RNA chain growth. A reactivity landscape was found, in which peptide formation strongly depends on the structure of the amino acid, but less on the nucleobase. For example, proline gives ribonucleotide-bound peptides most readily, tyrosine favors pyrophosphate and phosphodiester formation, and histidine gives phosphorimidazolides as dominant products. When proline and aspartic acid were allowed to compete for incorporation, only proline was found at the N-terminus of peptido chains. The reactivity described here links two fundamental classes of biomolecules through reactions that occur without enzymes, but with amino acid specificity.

摘要

核酸和多肽是生命的核心。有趣的是,人们不禁要问,这些生物聚合物的单体是否具有内在的反应性,使其在没有酶的情况下有利于寡聚化。我们最近观察到,当单体混合物在富含盐的缩合缓冲液中反应时,会形成共价连接的肽 RNA 链。在这里,我们报告了对 20 种蛋白质氨基酸和 4 种核苷酸的筛选结果。没有一种氨基酸能阻止磷酸二酯键的形成,因此所有氨基酸都可以通过 RNA 链的生长与遗传编码兼容。我们发现了一个反应性景观,其中肽的形成强烈依赖于氨基酸的结构,但对碱基的依赖较小。例如,脯氨酸最容易与核苷酸结合形成肽,酪氨酸有利于焦磷酸和磷酸二酯键的形成,组氨酸则以磷酸亚咪唑为主要产物。当允许脯氨酸和天冬氨酸竞争掺入时,只有脯氨酸被发现位于肽链的 N 末端。这里描述的反应性通过没有酶但具有氨基酸特异性的反应将两类基本的生物分子联系起来。

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