Xiong Wei, Yang Jiang-Ke, Chen Fang-Yuan, Han Zheng-Gang
College of Biology and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan 430023, China.
College of Biology and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan 430023, China.
Enzyme Microb Technol. 2017 Feb;97:71-81. doi: 10.1016/j.enzmictec.2016.11.007. Epub 2016 Nov 18.
The cellulase-mediated degradation of cellulosic materials, which is initiated by endoglucanases by the random cleavage of the glycosidic bonds between glucose units to break long cellulose molecules into shorter ones, represents a major carbon flow in the global carbon cycle. The structure of a typical endoglucanase contains a classical (α/β) barrel fold catalytic domain, a linker region and a cellulose-binding domain. In this study, we found that both the full-length enzyme and the catalytic domain of endoglucanase EGL1 cloned from Penicillium crustosum strain 601 have CMCase and FPase activity. A cellulose-binding assay using green fluorescent protein as a marker further showed that the catalytic domain could also bind the cellulose substrate. The three-dimensional structure of the catalytic domain of EGL1 revealed that this cellulose substrate-binding capacity of the catalytic domain may come from the hydrophobic core formed by aromatic amino acids distributed in or outside the (α/β) barrel fold. A glycine scanning mutagenesis assay further found that the aromatic amino acids at the bottom of the barrel fold and those adjacent to the catalytic site significantly affect the cellulolytic activity and the cellulose binding affinity of the catalytic domain. Thus, it could be speculated that the aromatic amino acids in the bottom of the barrel fold might be the main contributors in the binding capacity of the catalytic domain with the cellulose substrate, and those distributed around the active sites on the top of the enzyme might participate in moving the cellulose substrate to the active site in the barrel fold or releasing the hydrolysis products.
纤维素酶介导的纤维素材料降解是全球碳循环中的主要碳流,该过程由内切葡聚糖酶引发,通过随机切割葡萄糖单元之间的糖苷键,将长纤维素分子分解为较短的分子。典型的内切葡聚糖酶结构包含一个经典的(α/β)桶状折叠催化结构域、一个连接区和一个纤维素结合结构域。在本研究中,我们发现从 crustosum 菌株 601 克隆的内切葡聚糖酶 EGL1 的全长酶和催化结构域均具有 CMCase 和 FPase 活性。以绿色荧光蛋白为标记的纤维素结合试验进一步表明,催化结构域也能结合纤维素底物。EGL1 催化结构域的三维结构显示,该催化结构域的纤维素底物结合能力可能来自于分布在(α/β)桶状折叠内部或外部的芳香族氨基酸形成的疏水核心。甘氨酸扫描诱变试验进一步发现,桶状折叠底部和与催化位点相邻的芳香族氨基酸显著影响催化结构域的纤维素分解活性和纤维素结合亲和力。因此,可以推测桶状折叠底部的芳香族氨基酸可能是催化结构域与纤维素底物结合能力的主要贡献者,而分布在酶顶部活性位点周围的那些氨基酸可能参与将纤维素底物移动到桶状折叠中的活性位点或释放水解产物。