• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

crustosum内切葡聚糖酶EGL1纤维素结合结构域中的芳香族氨基酸对该酶的纤维素亲和力有不同贡献。

Aromatic amino acids in the cellulose binding domain of Penicillium crustosum endoglucanase EGL1 differentially contribute to the cellulose affinity of the enzyme.

作者信息

Yang Jiang-Ke, Xiong Wei, Chen Fang-Yuan, Xu Li, Han Zheng-Gang

机构信息

College of Biology and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan, China.

出版信息

PLoS One. 2017 May 5;12(5):e0176444. doi: 10.1371/journal.pone.0176444. eCollection 2017.

DOI:10.1371/journal.pone.0176444
PMID:28475645
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5419506/
Abstract

The cellulose binding domain (CBD) of cellulase binding to cellulosic materials is the initiation of a synergistic action on the enzymatic hydrolysis of the most abundant renewable biomass resources in nature. The binding of the CBD domain to cellulosic substrates generally relies on the interaction between the aromatic amino acids structurally located on the flat face of the CBD domain and the glucose rings of cellulose. In this study, we found the CBD domain of a newly cloned Penicillium crustosum endoglucanase EGL1, which was phylogenetically related to Aspergillus, Fusarium and Rhizopus, and divergent from the well-characterized Trichoderma reeseis cellulase CBD domain, contain two conserved aromatic amino acid-rich regions, Y451-Y452 and Y477-Y478-Y479, among which three amino acids Y451, Y477, and Y478 structurally sited on a flat face of this domain. Cellulose binding assays with green fluorescence protein as the marker, adsorption isotherm assays and an isothermal titration calorimetry assays revealed that although these three amino acids participated in this process, the Y451-Y452 appears to contribute more to the cellulose binding than Y477-Y478-Y479. Further glycine scanning mutagenesis and structural modelling revealed that the binding between CBD domain and cellulosic materials might be multi-amino-acids that participated in this process. The flexible poly-glucose molecule could contact Y451, Y477, and Y478 which form the contacting flat face of CBD domain as the typical model, some other amino acids in or outside the flat face might also participate in the interaction. Thus, it is possible that the conserved Y451-Y452 of CBD might have a higher chance of contacting the cellulosic substrates, contributing more to the affinity of CBD than the other amino acids.

摘要

纤维素酶的纤维素结合结构域(CBD)与纤维素材料的结合是自然界中最丰富的可再生生物质资源酶促水解协同作用的起始。CBD结构域与纤维素底物的结合通常依赖于结构上位于CBD结构域平面上的芳香族氨基酸与纤维素葡萄糖环之间的相互作用。在本研究中,我们发现新克隆的 crustosum 青霉内切葡聚糖酶EGL1的CBD结构域,其在系统发育上与曲霉属、镰刀菌属和根霉属相关,且与特征明确的里氏木霉纤维素酶CBD结构域不同,包含两个保守的富含芳香族氨基酸的区域,Y451 - Y452和Y477 - Y478 - Y479,其中三个氨基酸Y451、Y477和Y478结构上位于该结构域的平面上。以绿色荧光蛋白为标记的纤维素结合试验、吸附等温线试验和等温滴定量热试验表明,尽管这三个氨基酸参与了该过程,但Y451 - Y452似乎比Y477 - Y4

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/131cc6297b56/pone.0176444.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/93521f1cd926/pone.0176444.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/179ee9793e1a/pone.0176444.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/fc3a900d032a/pone.0176444.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/01c3d5b53519/pone.0176444.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/28a39df6b8df/pone.0176444.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/7f17e7f08239/pone.0176444.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/6dcf201f108e/pone.0176444.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/131cc6297b56/pone.0176444.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/93521f1cd926/pone.0176444.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/179ee9793e1a/pone.0176444.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/fc3a900d032a/pone.0176444.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/01c3d5b53519/pone.0176444.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/28a39df6b8df/pone.0176444.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/7f17e7f08239/pone.0176444.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/6dcf201f108e/pone.0176444.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfa3/5419506/131cc6297b56/pone.0176444.g008.jpg

相似文献

1
Aromatic amino acids in the cellulose binding domain of Penicillium crustosum endoglucanase EGL1 differentially contribute to the cellulose affinity of the enzyme.crustosum内切葡聚糖酶EGL1纤维素结合结构域中的芳香族氨基酸对该酶的纤维素亲和力有不同贡献。
PLoS One. 2017 May 5;12(5):e0176444. doi: 10.1371/journal.pone.0176444. eCollection 2017.
2
The catalytic domain of Penicillium crustosum endoglucanase EGL1 has cellulose-binding capacity and cellulolytic activity.扩展青霉内切葡聚糖酶EGL1的催化结构域具有纤维素结合能力和纤维素分解活性。
Enzyme Microb Technol. 2017 Feb;97:71-81. doi: 10.1016/j.enzmictec.2016.11.007. Epub 2016 Nov 18.
3
Properties and mutation analysis of the CelK cellulose-binding domain from the Clostridium thermocellum cellulosome.来自嗜热栖热放线菌纤维小体的CelK纤维素结合结构域的特性及突变分析
J Bacteriol. 2001 Mar;183(5):1552-9. doi: 10.1128/JB.183.5.1552-1559.2001.
4
Alteration of a single tryptophan residue of the cellulose-binding domain blocks secretion of the Erwinia chrysanthemi Cel5 cellulase (ex-EGZ) via the type II system.纤维素结合结构域中单个色氨酸残基的改变会阻碍菊欧文氏菌Cel5纤维素酶(外切葡聚糖酶Z)通过II型分泌系统的分泌。
J Mol Biol. 2000 Oct 20;303(2):117-23. doi: 10.1006/jmbi.2000.4103.
5
Fusion of cellulose binding domain from Trichoderma reesei CBHI to Cryptococcus sp. S-2 cellulase enhances its binding affinity and its cellulolytic activity to insoluble cellulosic substrates.将里氏木霉 CBHI 的纤维素结合结构域融合到隐球菌 S-2 纤维素酶中,可提高其对不溶性纤维素底物的结合亲和力和纤维素酶活性。
Enzyme Microb Technol. 2013 Apr 10;52(4-5):241-6. doi: 10.1016/j.enzmictec.2013.02.002. Epub 2013 Feb 13.
6
Structure and binding specificity of the second N-terminal cellulose-binding domain from Cellulomonas fimi endoglucanase C.来自纤维单胞菌内切葡聚糖酶C的第二个N端纤维素结合结构域的结构与结合特异性
Biochemistry. 2000 Mar 14;39(10):2445-58. doi: 10.1021/bi992079u.
7
CelG from Clostridium cellulolyticum: a multidomain endoglucanase acting efficiently on crystalline cellulose.来自解纤维梭菌的CelG:一种对结晶纤维素具有高效作用的多结构域内切葡聚糖酶。
J Bacteriol. 1997 Nov;179(21):6595-601. doi: 10.1128/jb.179.21.6595-6601.1997.
8
Enhancement of cellulase activity by clones selected from the combinatorial library of the cellulose-binding domain by cell surface engineering.通过细胞表面工程从纤维素结合结构域组合文库中筛选出的克隆对纤维素酶活性的增强作用。
Biotechnol Prog. 2006 Jul-Aug;22(4):933-8. doi: 10.1021/bp060129y.
9
Functional analysis of a hybrid endoglucanase of bacterial origin having a cellulose binding domain from a fungal exoglucanase.一种具有来自真菌外切葡聚糖酶的纤维素结合结构域的细菌源杂合内切葡聚糖酶的功能分析。
Appl Biochem Biotechnol. 1998 Nov-Dec;75(2-3):193-204. doi: 10.1007/BF02787774.
10
Three-dimensional structures of three engineered cellulose-binding domains of cellobiohydrolase I from Trichoderma reesei.里氏木霉纤维二糖水解酶I的三个工程化纤维素结合结构域的三维结构。
Protein Sci. 1997 Feb;6(2):294-303. doi: 10.1002/pro.5560060204.

引用本文的文献

1
Role of Natural Binding Proteins in Therapy and Diagnostics.天然结合蛋白在治疗与诊断中的作用。
Life (Basel). 2024 May 15;14(5):630. doi: 10.3390/life14050630.
2
Deconstruction and Reassembly of Renewable Polymers and Biocolloids into Next Generation Structured Materials.可再生聚合物和生物胶体的解构与重组,用于下一代结构材料。
Chem Rev. 2021 Nov 24;121(22):14088-14188. doi: 10.1021/acs.chemrev.0c01333. Epub 2021 Aug 20.
3
Analysis of the phosphorylome of trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A.

本文引用的文献

1
Cellulases: Classification, Methods of Determination and Industrial Applications.纤维素酶:分类、测定方法及工业应用
Appl Biochem Biotechnol. 2016 Aug;179(8):1346-80. doi: 10.1007/s12010-016-2070-3. Epub 2016 Apr 11.
2
O-glycosylation effects on family 1 carbohydrate-binding module solution structures.O-糖基化对家族 1 碳水化合物结合模块溶液结构的影响。
FEBS J. 2015 Nov;282(22):4341-56. doi: 10.1111/febs.13500. Epub 2015 Sep 21.
3
SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.
对在甘蔗渣上培养的里氏木霉磷酸化蛋白质组的分析表明,分泌型糖基水解酶Cel7A存在翻译后调控。
Biotechnol Rep (Amst). 2021 Jun 22;31:e00652. doi: 10.1016/j.btre.2021.e00652. eCollection 2021 Sep.
4
Immobilization and enzymatic properties of glutamate decarboxylase from Enterococcus faecium by affinity adsorption on regenerated chitin.通过在再生几丁质上的亲和吸附固定化粪肠球菌谷氨酸脱羧酶及其酶学性质。
Amino Acids. 2020 Dec;52(11-12):1479-1489. doi: 10.1007/s00726-020-02906-4. Epub 2020 Oct 31.
SWISS-MODEL:利用进化信息进行蛋白质三级和四级结构建模。
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W252-8. doi: 10.1093/nar/gku340. Epub 2014 Apr 29.
4
The effect of the cellulose-binding domain from Clostridium cellulovorans on the supramolecular structure of cellulose fibers.来源于纤维堆囊菌的纤维素结合结构域对纤维素纤维超分子结构的影响。
Carbohydr Res. 2010 Mar 30;345(5):621-30. doi: 10.1016/j.carres.2009.12.023. Epub 2009 Dec 29.
5
MolProbity: all-atom structure validation for macromolecular crystallography.MolProbity:用于大分子晶体学的全原子结构验证
Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):12-21. doi: 10.1107/S0907444909042073. Epub 2009 Dec 21.
6
Correlation between cellulose binding and activity of cellulose-binding domain mutants of Humicola grisea cellobiohydrolase 1.灰腐质霉纤维二糖水解酶1纤维素结合结构域突变体的纤维素结合与活性之间的相关性
FEBS Lett. 2007 Dec 22;581(30):5891-6. doi: 10.1016/j.febslet.2007.11.068. Epub 2007 Dec 3.
7
Fuel ethanol from cellulosic biomass.纤维素生物质燃料乙醇。
Science. 1991 Mar 15;251(4999):1318-23. doi: 10.1126/science.251.4999.1318.
8
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.MEGA4:分子进化遗传学分析(MEGA)软件版本4.0。
Mol Biol Evol. 2007 Aug;24(8):1596-9. doi: 10.1093/molbev/msm092. Epub 2007 May 7.
9
Characterization of a cellulase containing a family 30 carbohydrate-binding module (CBM) derived from Clostridium thermocellum CelJ: importance of the CBM to cellulose hydrolysis.来自嗜热栖热菌CelJ的含30家族碳水化合物结合模块(CBM)的纤维素酶的特性:CBM对纤维素水解的重要性
J Bacteriol. 2003 Jan;185(2):504-12. doi: 10.1128/JB.185.2.504-512.2003.
10
Microbial cellulose utilization: fundamentals and biotechnology.微生物纤维素利用:基础与生物技术
Microbiol Mol Biol Rev. 2002 Sep;66(3):506-77, table of contents. doi: 10.1128/MMBR.66.3.506-577.2002.