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一种用于禽呼肠孤病毒定性和定量检测的双链探针结合等温扩增技术。

A double-stranded probe coupled with isothermal amplification for qualitative and quantitative detection of avian reovirus.

作者信息

Kumar D, Chauhan T K S, Agarwal R K, Dhama K, Goswami P P, Mariappan A K, Tiwari A K, Mishra B P

机构信息

Division of Veterinary Biotechnology, Indian Veterinary Research Institute, Izatnagar, 243122, UP, India.

Division of Livestock Product Technology, Indian Veterinary Research Institute, Izatnagar, 243122, UP, India.

出版信息

Arch Virol. 2017 Apr;162(4):979-985. doi: 10.1007/s00705-016-3184-1. Epub 2016 Dec 24.

DOI:10.1007/s00705-016-3184-1
PMID:28013385
Abstract

We applied a probe-based real-time loop-mediated isothermal amplification (Cy5-RTqLAMP) technique targeting the avian reovirus (ARV) S3 gene to develop a rapid, sensitive, and specific method for virus detection and quantification. This test specifically detected the presence of ARV, but not other viruses or bacteria present in clinical or artificially spiked samples, including Newcastle disease virus, infectious bursal disease virus, fowl adenovirus, Marek's disease virus, Escherichia coli, and Salmonella spp. This test can detect ARV in less than one hour with an analytical sensitivity of 10 viral gene copies and 1 fg of total cDNA. The Cy5-RTqLAMP does not yield false positive results and is 100 times more sensitive than conventional PCR. This test was shown to be able to detect the presence of ARV in clinical samples. A similar strategy may be used for detection of other important human and animal viral pathogens.

摘要

我们应用了一种基于探针的实时环介导等温扩增技术(Cy5-RTqLAMP),该技术靶向禽呼肠孤病毒(ARV)S3基因,以开发一种用于病毒检测和定量的快速、灵敏且特异的方法。该检测方法能特异性检测到ARV的存在,但对临床样本或人工加样样本中存在的其他病毒或细菌无效,这些病毒和细菌包括新城疫病毒、传染性法氏囊病病毒、禽腺病毒、马立克氏病病毒、大肠杆菌和沙门氏菌属。该检测方法可在不到一小时内检测到ARV,分析灵敏度为10个病毒基因拷贝和1 fg的总cDNA。Cy5-RTqLAMP不会产生假阳性结果,且比传统PCR灵敏100倍。该检测方法已被证明能够检测临床样本中ARV的存在。类似的策略可用于检测其他重要的人类和动物病毒病原体。

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引用本文的文献

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Diagnostics (Basel). 2023 Apr 24;13(9):1530. doi: 10.3390/diagnostics13091530.
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Establishment of a Real-Time Recombinase Polymerase Amplification Assay for the Detection of Avian Reovirus.建立用于检测禽呼肠孤病毒的实时重组酶聚合酶扩增检测方法。
Front Vet Sci. 2020 Sep 22;7:551350. doi: 10.3389/fvets.2020.551350. eCollection 2020.
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Biotic concerns in generating molecular diagnosis matrixes for 4 avian viruses with emphasis on Marek's disease virus.
生成 4 种禽病毒分子诊断矩阵的生物安全问题,重点是马立克氏病病毒。
J Virol Methods. 2019 Dec;274:113708. doi: 10.1016/j.jviromet.2019.113708. Epub 2019 Jul 24.
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study on role of σB protein in avian reovirus pathogenesis.σB蛋白在禽呼肠孤病毒致病机制中的作用研究
Oncotarget. 2018 Apr 13;9(28):19569-19583. doi: 10.18632/oncotarget.24668.