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植物细胞器中的RNA编辑及其分子机制

RNA Editing and Its Molecular Mechanism in Plant Organelles.

作者信息

Ichinose Mizuho, Sugita Mamoru

机构信息

Center for Gene Research, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan.

Institute of Transformative Bio-Molecules, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan.

出版信息

Genes (Basel). 2016 Dec 23;8(1):5. doi: 10.3390/genes8010005.

Abstract

RNA editing by cytidine (C) to uridine (U) conversions is widespread in plant mitochondria and chloroplasts. In some plant taxa, "reverse" U-to-C editing also occurs. However, to date, no instance of RNA editing has yet been reported in green algae and the complex thalloid liverworts. RNA editing may have evolved in early land plants 450 million years ago. However, in some plant species, including the liverwort, , editing may have been lost during evolution. Most RNA editing events can restore the evolutionarily conserved amino acid residues in mRNAs or create translation start and stop codons. Therefore, RNA editing is an essential process to maintain genetic information at the RNA level. Individual RNA editing sites are recognized by plant-specific pentatricopeptide repeat (PPR) proteins that are encoded in the nuclear genome. These PPR proteins are characterized by repeat elements that bind specifically to RNA sequences upstream of target editing sites. In flowering plants, non-PPR proteins also participate in multiple RNA editing events as auxiliary factors. C-to-U editing can be explained by cytidine deamination. The proteins discovered to date are important factors for RNA editing but a RNA editing enzyme has yet to be identified.

摘要

通过胞嘧啶(C)向尿嘧啶(U)的转变进行的RNA编辑在植物线粒体和叶绿体中广泛存在。在一些植物类群中,也会发生“反向”的尿嘧啶向胞嘧啶的编辑。然而,迄今为止,在绿藻和复杂叶状体苔类植物中尚未有RNA编辑的实例报道。RNA编辑可能在4.5亿年前的早期陆地植物中就已经进化出来。然而,在一些植物物种中,包括苔类植物,编辑功能可能在进化过程中丢失了。大多数RNA编辑事件可以恢复mRNA中进化上保守的氨基酸残基,或者产生翻译起始和终止密码子。因此,RNA编辑是在RNA水平维持遗传信息的一个重要过程。单个RNA编辑位点由植物特有的五肽重复序列(PPR)蛋白识别,这些蛋白由核基因组编码。这些PPR蛋白的特征是具有能与目标编辑位点上游的RNA序列特异性结合的重复元件。在开花植物中,非PPR蛋白也作为辅助因子参与多个RNA编辑事件。胞嘧啶脱氨可以解释胞嘧啶向尿嘧啶的编辑。迄今为止发现的这些蛋白是RNA编辑的重要因子,但尚未鉴定出RNA编辑酶。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e814/5295000/75594b521c22/genes-08-00005-g001.jpg

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