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小鼠磨牙发育过程中的昼夜节律与基因表达。

Circadian rhythms and gene expression during mouse molar tooth development.

作者信息

Nirvani Minou, Khuu Cuong, Utheim Tor Paaske, Hollingen Henriette Stavik, Amundsen Simon Furre, Sand Lars Peter, Sehic Amer

机构信息

a Department of Oral Biology, Faculty of Dentistry , University of Oslo , Oslo , Norway.

b Department of Medical Biochemistry , Oslo University Hospital , Oslo , Norway.

出版信息

Acta Odontol Scand. 2017 Mar;75(2):144-153. doi: 10.1080/00016357.2016.1271999. Epub 2016 Dec 28.

Abstract

OBJECTIVES

Incremental markings in dental enamel suggest that the circadian clock may influence the molecular underpinnings orchestrating enamel formation. The aim of this study was to investigate whether the genes and microRNAs (miRNAs) oscillate in a circadian pattern during tooth and enamel development.

MATERIAL AND METHODS

Comparative gene and miRNA expression profiling of the first mandibular molar tooth germ isolated at different time-points during the light and night period was performed using microarrays and validated using real-time RT-PCR. Bioinformatic analysis was carried out using Ingenuity Pathway Analysis (IPA), and TargetScan software was used in order to identify computationally predicted miRNA-mRNA target relationships.

RESULTS

In total, 439 genes and 32 miRNAs exhibited significantly different (p < 0.05) levels of expression in the light phase compared with the night phase tooth germs. Genes involved in enamel formation, i.e. Amelx, Ambn, Amtn, and Odam, oscillated in a circadian pattern. Furthermore, the circadian clock genes, in particular Clock and Bmal1, oscillated in mouse molar tooth germ during 24-h intervals. The expression of Clock and Bmal1 was inversely correlated with the expression of miR-182 and miR-141, respectively.

CONCLUSIONS

MiRNAs, including miR-182 and miR-141, are involved in the control of peripheral circadian rhythms in the developing tooth by regulating the expression of genes coding for circadian transcription factors such as CLOCK and BMAL1. Regulation of circadian rhythms may be important for enamel phenotype, and the morphology of dental enamel may vary between individuals due to differences in circadian profiles.

摘要

目的

牙釉质中的增量标记表明昼夜节律时钟可能影响协调釉质形成的分子基础。本研究的目的是调查在牙齿和牙釉质发育过程中,基因和微小RNA(miRNA)是否以昼夜节律模式振荡。

材料与方法

使用微阵列对在白天和夜间不同时间点分离的第一下颌磨牙牙胚进行比较基因和miRNA表达谱分析,并使用实时逆转录聚合酶链反应进行验证。使用 Ingenuity Pathway Analysis(IPA)进行生物信息学分析,并使用TargetScan软件来识别通过计算预测的miRNA- mRNA靶标关系。

结果

与夜间牙胚相比,共有439个基因和32个miRNA在白天阶段表现出显著不同(p < 0.05)的表达水平。参与釉质形成的基因,即Amelx、Ambn、Amtn和Odam,以昼夜节律模式振荡。此外,昼夜节律时钟基因,特别是Clock和Bmal1,在小鼠磨牙牙胚中每隔24小时振荡一次。Clock和Bmal1的表达分别与miR-182和miR-141的表达呈负相关。

结论

包括miR-182和miR-141在内的miRNA通过调节编码昼夜节律转录因子(如CLOCK和BMAL1)的基因表达,参与发育中牙齿外周昼夜节律的控制。昼夜节律的调节可能对釉质表型很重要,并且由于昼夜节律谱的差异,牙釉质的形态在个体之间可能会有所不同。

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