• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

由单链DNA和DNA损伤诱导的重组酶内含肽的蛋白质剪接

Protein splicing of a recombinase intein induced by ssDNA and DNA damage.

作者信息

Lennon Christopher W, Stanger Matthew, Belfort Marlene

机构信息

Department of Biological Sciences, RNA Institute, University at Albany, Albany, New York 12222, USA.

Department of Biomedical Sciences, School of Public Health, University at Albany, Albany, New York 12201, USA.

出版信息

Genes Dev. 2016 Dec 15;30(24):2663-2668. doi: 10.1101/gad.289280.116. Epub 2016 Dec 28.

DOI:10.1101/gad.289280.116
PMID:28031248
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5238726/
Abstract

Inteins (or protein introns) autocatalytically excise themselves through protein splicing. We challenge the long-considered notion that inteins are merely molecular parasites and posit that some inteins evolved to regulate host protein function. Here we show substrate-induced and DNA damage-induced splicing, in which an archaeal recombinase RadA intein splices dramatically faster and more accurately when provided with ssDNA. This unprecedented example of intein splicing stimulation by the substrate of the invaded host protein provides compelling support in favor of inteins acting as pause buttons to arrest protein function until needed; then, an immediate activity switch is triggered, representing a new form of post-translational control.

摘要

内含肽(或蛋白质内含子)通过蛋白质剪接进行自我催化切除。我们对长期以来认为内含肽仅仅是分子寄生物的观点提出质疑,并认为一些内含肽进化而来是为了调节宿主蛋白质的功能。在这里,我们展示了底物诱导和DNA损伤诱导的剪接,其中一种古菌重组酶RadA内含肽在有单链DNA时剪接速度显著加快且更准确。这种由被入侵宿主蛋白质的底物刺激内含肽剪接的前所未有的例子,为内含肽作为暂停按钮以阻止蛋白质功能直到需要时的观点提供了有力支持;然后,触发立即的活性转换,这代表了一种新的翻译后控制形式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/e7f9d0697ec1/2663f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/411ad69a5c7f/2663f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/c0bc35a5e696/2663f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/466b5cd8444a/2663f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/1e3b40e0b102/2663f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/e7f9d0697ec1/2663f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/411ad69a5c7f/2663f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/c0bc35a5e696/2663f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/466b5cd8444a/2663f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/1e3b40e0b102/2663f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b90/5238726/e7f9d0697ec1/2663f05.jpg

相似文献

1
Protein splicing of a recombinase intein induced by ssDNA and DNA damage.由单链DNA和DNA损伤诱导的重组酶内含肽的蛋白质剪接
Genes Dev. 2016 Dec 15;30(24):2663-2668. doi: 10.1101/gad.289280.116. Epub 2016 Dec 28.
2
Conditional Protein Splicing Switch in Hyperthermophiles through an Intein-Extein Partnership.通过内含肽-外显肽的合作实现超嗜热菌中的条件蛋白剪接开关。
mBio. 2018 Jan 30;9(1):e02304-17. doi: 10.1128/mBio.02304-17.
3
Intein splicing efficiency and RadA levels can control the mode of archaeal DNA replication.内含肽剪接效率和 RadA 水平可以控制古菌 DNA 复制的模式。
Sci Adv. 2024 Sep 20;10(38):eadp4995. doi: 10.1126/sciadv.adp4995. Epub 2024 Sep 18.
4
Mechanism of Single-Stranded DNA Activation of Recombinase Intein Splicing.单链 DNA 激活重组酶内含肽剪接的机制。
Biochemistry. 2019 Aug 6;58(31):3335-3339. doi: 10.1021/acs.biochem.9b00506. Epub 2019 Jul 23.
5
Post-translational environmental switch of RadA activity by extein-intein interactions in protein splicing.蛋白质剪接过程中通过外显肽-内含肽相互作用实现的RadA活性的翻译后环境开关。
Nucleic Acids Res. 2015 Jul 27;43(13):6631-48. doi: 10.1093/nar/gkv612. Epub 2015 Jun 22.
6
Regulation of protein activity with small-molecule-controlled inteins.利用小分子控制内含肽对蛋白质活性的调控
Protein Sci. 2005 Feb;14(2):523-32. doi: 10.1110/ps.04996905. Epub 2005 Jan 4.
7
NMR and crystal structures of the Pyrococcus horikoshii RadA intein guide a strategy for engineering a highly efficient and promiscuous intein.Pyrococcus horikoshii RadA 内含肽的 NMR 和晶体结构为设计高效广谱内含肽提供了策略。
J Mol Biol. 2012 Aug 3;421(1):85-99. doi: 10.1016/j.jmb.2012.04.029. Epub 2012 May 2.
8
Evaluation and comparison of protein splicing by exogenous inteins with foreign exteins in Escherichia coli.在大肠杆菌中外源内肽与外肽的蛋白质剪接的评价与比较。
FEBS Lett. 2011 Nov 4;585(21):3471-7. doi: 10.1016/j.febslet.2011.10.005. Epub 2011 Oct 10.
9
Conditional DnaB Protein Splicing Is Reversibly Inhibited by Zinc in Mycobacteria.条件性 DnaB 蛋白剪接可被分枝杆菌中的锌可逆抑制。
mBio. 2020 Jul 14;11(4):e01403-20. doi: 10.1128/mBio.01403-20.
10
Conditional Alternative Protein Splicing Promoted by Inteins from .条件性替代蛋白剪接由. 中的内肽酶促进
Biochemistry. 2022 Feb 15;61(4):294-302. doi: 10.1021/acs.biochem.1c00788. Epub 2022 Jan 24.

引用本文的文献

1
Monitoring Protein Stability In Vivo Using an Intein-Based Biosensor.使用基于内含肽的生物传感器在体内监测蛋白质稳定性
Bio Protoc. 2025 Apr 20;15(8):e5271. doi: 10.21769/BioProtoc.5271.
2
Intein splicing efficiency and RadA levels can control the mode of archaeal DNA replication.内含肽剪接效率和 RadA 水平可以控制古菌 DNA 复制的模式。
Sci Adv. 2024 Sep 20;10(38):eadp4995. doi: 10.1126/sciadv.adp4995. Epub 2024 Sep 18.
3
Conditional protein splicing of the Mycobacterium tuberculosis RecA intein in its native host.结核分枝杆菌 RecA 内含肽在其天然宿主中的条件性蛋白剪接。

本文引用的文献

1
Impact of a homing intein on recombination frequency and organismal fitness.归巢内含肽对重组频率和生物体适应性的影响。
Proc Natl Acad Sci U S A. 2016 Aug 9;113(32):E4654-61. doi: 10.1073/pnas.1606416113. Epub 2016 Jul 26.
2
RecA: Regulation and Mechanism of a Molecular Search Engine.RecA:一种分子搜索引擎的调控与机制
Trends Biochem Sci. 2016 Jun;41(6):491-507. doi: 10.1016/j.tibs.2016.04.002. Epub 2016 May 4.
3
Salt-Dependent Conditional Protein Splicing of an Intein from Halobacterium salinarum.盐依赖型嗜盐菌内含肽的条件性蛋白质剪接
Sci Rep. 2024 Sep 5;14(1):20664. doi: 10.1038/s41598-024-71248-y.
4
Improved protein splicing through viral passaging.通过病毒传代提高蛋白质剪接。
mBio. 2024 Jun 12;15(6):e0098424. doi: 10.1128/mbio.00984-24. Epub 2024 May 23.
5
Conditional protein splicing of the RecA intein in its native host.RecA内含肽在其天然宿主中的条件性蛋白质剪接。
bioRxiv. 2024 Apr 15:2024.04.15.589443. doi: 10.1101/2024.04.15.589443.
6
An intein-based biosensor to measure protein stability in vivo.基于内含子的生物传感器,用于测量体内蛋白质稳定性。
Protein Sci. 2024 Mar;33(3):e4925. doi: 10.1002/pro.4925.
7
Inteins-mechanism of protein splicing, emerging regulatory roles, and applications in protein engineering.内含肽——蛋白质剪接机制、新兴调控作用及在蛋白质工程中的应用
Front Microbiol. 2023 Nov 8;14:1305848. doi: 10.3389/fmicb.2023.1305848. eCollection 2023.
8
A Chemical Biology Primer for NMR Spectroscopists.面向核磁共振光谱学家的化学生物学入门指南。
J Magn Reson Open. 2022 Jun;10-11. doi: 10.1016/j.jmro.2022.100044. Epub 2022 Feb 18.
9
The Evolution of Intein-Based Affinity Methods as Reflected in 30 years of Patent History.基于内含肽的亲和方法的演变:30年专利历史的体现
Front Mol Biosci. 2022 Apr 8;9:857566. doi: 10.3389/fmolb.2022.857566. eCollection 2022.
10
Recruitment of Mobile Genetic Elements for Diverse Cellular Functions in Prokaryotes.原核生物中移动遗传元件参与多种细胞功能的招募
Front Mol Biosci. 2022 Mar 24;9:821197. doi: 10.3389/fmolb.2022.821197. eCollection 2022.
Biochemistry. 2016 Mar 8;55(9):1279-82. doi: 10.1021/acs.biochem.6b00128. Epub 2016 Feb 26.
4
Intein Clustering Suggests Functional Importance in Different Domains of Life.内含肽聚类表明其在生命不同领域具有功能重要性。
Mol Biol Evol. 2016 Mar;33(3):783-99. doi: 10.1093/molbev/msv271. Epub 2015 Nov 25.
5
SufB intein of Mycobacterium tuberculosis as a sensor for oxidative and nitrosative stresses.结核分枝杆菌的SufB内含肽作为氧化应激和亚硝化应激的传感器。
Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10348-53. doi: 10.1073/pnas.1512777112. Epub 2015 Aug 3.
6
Post-translational environmental switch of RadA activity by extein-intein interactions in protein splicing.蛋白质剪接过程中通过外显肽-内含肽相互作用实现的RadA活性的翻译后环境开关。
Nucleic Acids Res. 2015 Jul 27;43(13):6631-48. doi: 10.1093/nar/gkv612. Epub 2015 Jun 22.
7
Protein splicing: how inteins escape from precursor proteins.蛋白质剪接:内含肽如何从前体蛋白中释放出来。
J Biol Chem. 2014 May 23;289(21):14498-505. doi: 10.1074/jbc.R113.540310. Epub 2014 Apr 2.
8
Inteins: Nature's Gift to Protein Chemists.内含肽:大自然给予蛋白质化学家的礼物。
Chem Sci. 2014;5(1):446-461. doi: 10.1039/C3SC52951G.
9
Intermolecular domain swapping induces intein-mediated protein alternative splicing.分子间结构域交换诱导内含肽介导的蛋白质选择性剪接。
Nat Chem Biol. 2013 Oct;9(10):616-22. doi: 10.1038/nchembio.1320. Epub 2013 Aug 25.
10
Trashing of single-stranded DNA generated during processing of arrested replication fork in E. coli.在大肠杆菌中处理停滞复制叉时产生的单链 DNA 的破坏。
J Mol Biol. 2013 Nov 29;425(23):4837-44. doi: 10.1016/j.jmb.2013.06.027. Epub 2013 Jun 28.