Suppr超能文献

酿酒酵母中NAD⁺封端mRNA的鉴定。

Identification of NAD+ capped mRNAs in Saccharomyces cerevisiae.

作者信息

Walters Robert W, Matheny Tyler, Mizoue Laura S, Rao Bhalchandra S, Muhlrad Denise, Parker Roy

机构信息

Department of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, CO 80303.

Howard Hughes Medical Institute, University of Colorado Boulder, Boulder, CO 80303.

出版信息

Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):480-485. doi: 10.1073/pnas.1619369114. Epub 2016 Dec 28.

Abstract

RNAs besides tRNA and rRNA contain chemical modifications, including the recently described 5' nicotinamide-adenine dinucleotide (NAD) RNA in bacteria. Whether 5' NAD-RNA exists in eukaryotes remains unknown. We demonstrate that 5' NAD-RNA is found on subsets of nuclear and mitochondrial encoded mRNAs in Saccharomyces cerevisiae NAD-mRNA appears to be produced cotranscriptionally because NAD-RNA is also found on pre-mRNAs, and only on mitochondrial transcripts that are not 5' end processed. These results define an additional 5' RNA cap structure in eukaryotes and raise the possibility that this 5' NAD cap could modulate RNA stability and translation on specific subclasses of mRNAs.

摘要

除了转运RNA(tRNA)和核糖体RNA(rRNA)之外,核糖核酸(RNA)还含有化学修饰,包括细菌中最近描述的5'-烟酰胺腺嘌呤二核苷酸(NAD)RNA。真核生物中是否存在5'-NAD-RNA仍然未知。我们证明,在酿酒酵母中,5'-NAD-RNA存在于核编码和线粒体编码的信使核糖核酸(mRNA)亚群上。NAD-mRNA似乎是在转录过程中产生的,因为在信使前体核糖核酸(pre-mRNA)上也发现了NAD-RNA,并且仅在线粒体转录本上发现,这些转录本的5'端未经过加工。这些结果定义了真核生物中一种额外的5'RNA帽结构,并增加了这种5'-NAD帽可能调节特定mRNA亚类的RNA稳定性和翻译的可能性。

相似文献

1
Identification of NAD+ capped mRNAs in Saccharomyces cerevisiae.酿酒酵母中NAD⁺封端mRNA的鉴定。
Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):480-485. doi: 10.1073/pnas.1619369114. Epub 2016 Dec 28.
5
Identification of a quality-control mechanism for mRNA 5'-end capping.鉴定 mRNA 5'端加帽的质量控制机制。
Nature. 2010 Sep 30;467(7315):608-11. doi: 10.1038/nature09338. Epub 2010 Aug 29.
8
Eukaryotic RNA 5'-End NAD Capping and DeNADding.真核 RNA 5′-端 NAD 加帽和去 NAD 化。
Trends Cell Biol. 2018 Jun;28(6):454-464. doi: 10.1016/j.tcb.2018.02.005. Epub 2018 Mar 12.

引用本文的文献

5
Mitochondrial RNA maturation.线粒体 RNA 成熟。
RNA Biol. 2024 Jan;21(1):28-39. doi: 10.1080/15476286.2024.2414157. Epub 2024 Oct 10.
8
If the 5' cap fits (wear it) - Non-canonical RNA capping.如果 5' 帽子合适(就戴上它)——非规范 RNA 加帽。
RNA Biol. 2024 Jan;21(1):1-13. doi: 10.1080/15476286.2024.2372138. Epub 2024 Jul 15.
9
HIV-1 Infection Reduces NAD Capping of Host Cell snRNA and snoRNA.HIV-1 感染降低了宿主细胞 snRNA 和 snoRNA 的 NAD 加帽。
ACS Chem Biol. 2024 Jun 21;19(6):1243-1249. doi: 10.1021/acschembio.4c00151. Epub 2024 May 15.

本文引用的文献

5
5' UTR m(6)A Promotes Cap-Independent Translation.5'非翻译区N6-甲基腺苷促进不依赖帽子结构的翻译。
Cell. 2015 Nov 5;163(4):999-1010. doi: 10.1016/j.cell.2015.10.012. Epub 2015 Oct 22.
6
Modifications on Translation Initiation.翻译起始的修饰。
Cell. 2015 Nov 5;163(4):796-8. doi: 10.1016/j.cell.2015.10.056.
9
HTSeq--a Python framework to work with high-throughput sequencing data.HTSeq——一个用于处理高通量测序数据的Python框架。
Bioinformatics. 2015 Jan 15;31(2):166-9. doi: 10.1093/bioinformatics/btu638. Epub 2014 Sep 25.
10
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic:一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验