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超级增强子的研究进展

Advance in the research on super-enhancer.

作者信息

Sun Chang-bin, Zhang Xi

机构信息

BGI-Shenzhen, Shenzhen 518083, China.

出版信息

Yi Chuan. 2016 Dec 20;38(12):1056-1068. doi: 10.16288/j.yczz.16-158.

Abstract

Super-enhancers (SEs) are large clusters of transcriptional enhancers that drive expression of genes controlling cell identity. They play important roles in development, disease initiation and progression such as tumorigenesis. Compared to typical enhancers (TEs), most key oncogenes in tumor cells are driven by SEs, and common diseases such as Alzheimer's disease related variations are enriched in SEs. SEs hold great promising in key oncogenes identification and diseases-associated variants discovery. In this review, we first summarize how to identify enhancers on a genome-wide scale, and then introduce the concept of SEs and the methodology for SEs identification. Lastly, we describe SEs' main structural and functional properties and discuss its application in the future research.

摘要

超级增强子(SEs)是驱动控制细胞身份的基因表达的大型转录增强子簇。它们在发育、疾病起始和进展(如肿瘤发生)中发挥重要作用。与典型增强子(TEs)相比,肿瘤细胞中的大多数关键癌基因由SEs驱动,并且诸如阿尔茨海默病相关变异等常见疾病在SEs中富集。SEs在关键癌基因鉴定和疾病相关变异发现方面具有巨大潜力。在本综述中,我们首先总结如何在全基因组范围内鉴定增强子,然后介绍SEs的概念和SEs鉴定方法。最后,我们描述SEs的主要结构和功能特性,并讨论其在未来研究中的应用。

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