Geng Xin, Pu Weilin, Tan Yulong, Lu Zhouyi, Wang An, Tan Lixing, Chen Sidi, Guo Shicheng, Wang Jiucun, Chen Xiaofeng
Department of Cardiothoracic Surgery, Huashan Hospital, Fudan University, Shanghai 200032, China.
State Key Laboratory of Genetic Engineering, Collaborative Innovation Center for Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.
Oncotarget. 2017 Jan 24;8(4):6845-6856. doi: 10.18632/oncotarget.14256.
Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, thirteen studies, including 2,119 samples were included in our meta-analysis. Simultaneously, four independent DNA methylation datasets from TCGA and GEO database were analyzed for validation. The pooled odds ratio of FHIT promoter methylation in cancer samples was 3.43 (95% CI: 1.85 to 6.36) compared with that in controls. In subgroup analysis, significant difference of FHIT gene promoter methylation status in NSCLC and controls was found in Asians but not in Caucasian population. In validation stage, 950 Caucasian samples, including 126 paired samples from TCGA, 568 cancer tissues and 256 normal controls from GEO database were analyzed, and all 8 CpG sites near the promoter region of FHIT gene were not significantly differentially methylated. Thus the diagnostic role of FHIT gene in the lung cancer may be relatively limited in the Caucasian population but useful in the Asians.
启动子区域获得性CpG岛的异常甲基化在致癌过程中起重要作用。越来越多的证据表明,FHIT基因启动子高甲基化与非小细胞肺癌(NSCLC)有关。为了检验FHIT甲基化状态对NSCLC的诊断能力,我们的荟萃分析纳入了13项研究,共2119个样本。同时,对来自TCGA和GEO数据库的四个独立DNA甲基化数据集进行分析以作验证。与对照组相比,癌症样本中FHIT启动子甲基化的合并比值比为3.43(95%置信区间:1.85至6.36)。亚组分析发现,亚洲人群中NSCLC与对照组的FHIT基因启动子甲基化状态存在显著差异,而白种人群中无此差异。在验证阶段,分析了950个白种人样本,包括来自TCGA的126对配对样本、来自GEO数据库的568个癌组织和256个正常对照,FHIT基因启动子区域附近的所有8个CpG位点甲基化均无显著差异。因此,FHIT基因在肺癌中的诊断作用在白种人群中可能相对有限,但在亚洲人群中有用。