Zhou Shenghu, Du Guocheng, Kang Zhen, Li Jianghua, Chen Jian, Li Huazhong, Zhou Jingwen
Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Road, Wuxi, 214122, Jiangsu, China.
Synergetic Innovation Center of Food Safety and Nutrition, 1800 Lihu Road, Wuxi, 214122, Jiangsu, China.
World J Microbiol Biotechnol. 2017 Feb;33(2):23. doi: 10.1007/s11274-016-2184-3. Epub 2017 Jan 2.
Production of useful chemicals by industrial microorganisms has been attracting more and more attention. Microorganisms screened from their natural environment usually suffer from low productivity, low stress resistance, and accumulation of by-products. In order to overcome these disadvantages, rational engineering of microorganisms to achieve specific industrial goals has become routine. Rapid development of metabolic engineering and synthetic biology strategies provide novel methods to improve the performance of industrial microorganisms. Rational regulation of gene expression by specific promoters is essential to engineer industrial microorganisms for high-efficiency production of target chemicals. Identification, modification, and application of suitable promoters could provide powerful switches at the transcriptional level for fine-tuning of a single gene or a group of genes, which are essential for the reconstruction of pathways. In this review, the characteristics of promoters from eukaryotic, prokaryotic, and archaea microorganisms are briefly introduced. Identification of promoters based on both traditional biochemical and systems biology routes are summarized. Besides rational modification, de novo design of promoters to achieve gradient, dynamic, and logic gate regulation are also introduced. Furthermore, flexible application of static and dynamic promoters for the rational engineering of industrial microorganisms is highlighted. From the perspective of powerful promoters in industrial microorganisms, this review will provide an extensive description of how to regulate gene expression in industrial microorganisms to achieve more useful goals.
利用工业微生物生产有用化学品越来越受到关注。从自然环境中筛选出的微生物通常存在生产率低、抗逆性差和副产物积累等问题。为了克服这些缺点,对微生物进行合理改造以实现特定的工业目标已成为常规做法。代谢工程和合成生物学策略的快速发展为提高工业微生物的性能提供了新方法。通过特定启动子对基因表达进行合理调控对于改造工业微生物以高效生产目标化学品至关重要。鉴定、修饰和应用合适的启动子可以在转录水平上提供强大的开关,用于微调单个基因或一组基因,这对于途径重建至关重要。在这篇综述中,简要介绍了真核、原核和古生菌微生物启动子的特点。总结了基于传统生化和系统生物学途径的启动子鉴定方法。除了合理修饰外,还介绍了从头设计启动子以实现梯度、动态和逻辑门调控。此外,还强调了静态和动态启动子在工业微生物合理改造中的灵活应用。从工业微生物中强大启动子的角度来看,这篇综述将广泛描述如何调控工业微生物中的基因表达以实现更有用的目标。