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分类基因组学以及新属、新种、马赛P2517菌株的描述,该新细菌属从人类阴道中分离得到。

Taxonogenomics and description of gen. nov., sp. nov., strain Marseille P2517, a new bacterial genus isolated from the human vagina.

作者信息

Diop K, Bretelle F, Michelle C, Richez M, Rathored J, Raoult D, Fournier P-E, Fenollar F

机构信息

Institut hospitalo-universitaire Méditerranée-infection, Aix-Marseille Université, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Marseille, France.

Department of Gynecology and Obstetrics, Gynépole, Aix-Marseille Université, Hôpital Nord, Assistance Publique-Hôpitaux de Marseille, Marseille, France.

出版信息

New Microbes New Infect. 2016 Nov 25;15:94-103. doi: 10.1016/j.nmni.2016.11.006. eCollection 2017 Jan.

DOI:10.1016/j.nmni.2016.11.006
PMID:28053707
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5199151/
Abstract

An obligate aerobic, Gram-negative, nonmotile and nonsporulating rod designated Marseille P2517 was isolated from the vaginal flora. We describe its features, annotate the genome and compare it to the closest species. The 16S rRNA analysis shows 93.03% sequence similarity with the phylogenetically closest species. Its genome is 2 434 475 bp long and presents 38.16% G+C. On the basis of these data, it can be considered as a new genus in the family, for which we proposed the name gen. nov., sp. nov. The type strain is Marseille P2517.

摘要

从阴道菌群中分离出一株专性需氧、革兰氏阴性、无运动性且不产芽孢的杆菌,命名为马赛P2517。我们描述了它的特征,注释了基因组,并将其与亲缘关系最近的物种进行比较。16S rRNA分析显示,它与亲缘关系最近的物种的序列相似性为93.03%。其基因组长度为2434475 bp,G+C含量为38.16%。基于这些数据,它可被认为是该科中的一个新属,我们为此提议命名为新属,新种。模式菌株为马赛P2517。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/f71508dfd03d/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/74432b6c36b0/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/bf403cf52f8e/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/b1498b15cc4c/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/8dc3ecd14bfb/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/3bac3fe48d06/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/3d4ac05f0cd1/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/f71508dfd03d/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/74432b6c36b0/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/bf403cf52f8e/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/b1498b15cc4c/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/8dc3ecd14bfb/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/3bac3fe48d06/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/3d4ac05f0cd1/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16a4/5199151/f71508dfd03d/gr7.jpg

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