• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

新种，从一名健康男性俾格米人的粪便样本中分离出的一种新细菌。

sp. nov., a new bacterium isolated in a stool sample from a healthy male pygmy.

作者信息

Boxberger M, Hasni I, Bilen M, La Scola B

机构信息

Aix Marseille Univ, IRD, AP-HM, MEФI, Marseille, France.

IHU-Méditerranée Infection, Marseille, France.

出版信息

New Microbes New Infect. 2020 Jan 23;34:100644. doi: 10.1016/j.nmni.2019.100644. eCollection 2020 Mar.

DOI:10.1016/j.nmni.2019.100644
PMID:32089841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7026284/
Abstract

An obligate aerobic, Gram-positive, non-sporulating, rod-shaped bacterium designated Marseille P3888 was isolated from the stool sample of a healthy male pygmy. We described its main characteristics, and sequenced and annotated its genome. The 16S rRNA analysis revealed 98.10% sequence similarity with Corynebacterium terpenotabidum, the phylogenetically closest species with standing in nomenclature. The genome had a size of 3142051 bp with a guanine + cytosine content of 66.83%. We proposed the creation of the new sp. nov. strain Marseille-P3888.

摘要

从一名健康男性俾格米人的粪便样本中分离出一株专性需氧、革兰氏阳性、无芽孢、杆状的细菌，命名为马赛P3888。我们描述了它的主要特征，并对其基因组进行了测序和注释。16S rRNA分析显示，它与萜类棒状杆菌的序列相似性为98.10%，萜类棒状杆菌是系统发育上最接近且有命名地位的物种。该基因组大小为3142051 bp，鸟嘌呤+胞嘧啶含量为66.83%。我们提议创建新的sp. nov.菌株马赛 - P3888。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/ac4b1f1a84b5/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/f9deccb28317/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/2636c3143ccf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/c061f70b736f/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/ac4b1f1a84b5/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/f9deccb28317/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/2636c3143ccf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/c061f70b736f/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d7b/7026284/ac4b1f1a84b5/gr4.jpg

相似文献

1
sp. nov., a new bacterium isolated in a stool sample from a healthy male pygmy.新种，从一名健康男性俾格米人的粪便样本中分离出的一种新细菌。
New Microbes New Infect. 2020 Jan 23;34:100644. doi: 10.1016/j.nmni.2019.100644. eCollection 2020 Mar.
2
sp. nov., a new bacterium isolated from dental plaque of a woman with periodontitis.新种，一种从一名患有牙周炎的女性牙菌斑中分离出的新细菌。
New Microbes New Infect. 2019 Nov 29;33:100625. doi: 10.1016/j.nmni.2019.100625. eCollection 2020 Jan.
3
Noncontiguous finished genome sequence and description of Raoultibacter massiliensis gen. nov., sp. nov. and Raoultibacter timonensis sp. nov, two new bacterial species isolated from the human gut.非连续完成的基因组序列和 Raoultibacter massiliensis 属。nov.，sp。nov.和 Raoultibacter timonensis sp。nov 的描述，两种从人类肠道中分离出来的新细菌物种。
Microbiologyopen. 2019 Jun;8(6):e00758. doi: 10.1002/mbo3.758. Epub 2019 Jan 30.
4
Miniphocibacter massiliensis gen. nov., sp. nov., a new species isolated from the human gut and its taxono-genomics description.麦氏小杆菌属，新属，新种，从人类肠道中分离到的一种新物种及其分类基因组描述。
Microbiologyopen. 2019 May;8(5):e00735. doi: 10.1002/mbo3.735. Epub 2018 Oct 2.
5
gen. nov., sp. nov., a new bacterium isolated from the vagina flora and its taxono-genomic description.新属，新种，一种从阴道菌群中分离出的新细菌及其分类基因组描述。
New Microbes New Infect. 2019 Sep 7;32:100601. doi: 10.1016/j.nmni.2019.100601. eCollection 2019 Nov.
6
Taxono-genomics description of sp. nov.', strain Marseille-P4006, a new species isolated from the female genital tract of a patient with bacterial vaginosis.从一名患有细菌性阴道病患者的女性生殖道中分离出的新物种“sp. nov.”、马赛 - P4006菌株的分类基因组学描述。
New Microbes New Infect. 2019 Mar 22;29:100534. doi: 10.1016/j.nmni.2019.100534. eCollection 2019 May.
7
Genomic description and characterization of Nigeribacterium massiliense gen. nov., sp. nov., isolated from the human gut.从人类肠道分离出的马西利亚尼日尔杆菌新属新种的基因组描述与特征分析
Microbes Infect. 2021 Sep-Oct;23(8):104842. doi: 10.1016/j.micinf.2021.104842. Epub 2021 May 19.
8
Ottowia massiliensis sp. nov., a new bacterium isolated from a fresh, healthy human fecal sample.马西利奥特氏菌（Ottowia massiliensis）sp. nov.，一种从新鲜、健康的人类粪便样本中分离出来的新细菌。
FEMS Microbiol Lett. 2022 Sep 20;369(1). doi: 10.1093/femsle/fnac086.
9
sp. nov., a new bacterium isolated from a fresh human stool specimen.新种，从一份新鲜人类粪便样本中分离出的一种新细菌。
New Microbes New Infect. 2019 Sep 7;32:100602. doi: 10.1016/j.nmni.2019.100602. eCollection 2019 Nov.
10
Prevotella merdae sp. nov., a new bacterial species isolated from human faeces.屎拟普雷沃氏菌，一种从人类粪便中分离出来的新型细菌。
FEMS Microbiol Lett. 2022 Sep 20;369(1). doi: 10.1093/femsle/fnac066.

引用本文的文献

1
Validation List no. 222. Valid publication of new names and new combinations effectively published outside the .验证列表编号222。新名称和新组合在[具体范围]之外有效发表的有效出版物。 需注意，原文中“outside the.”表述不完整，可能影响准确理解其确切含义。
Int J Syst Evol Microbiol. 2025 Mar;75(3). doi: 10.1099/ijsem.0.006640.
2
Corynebacterium kalidii sp. nov, an endophyte from a shoot of the halophyte Kalidium cuspidatum.新种盐生棒杆菌，一种来自盐生植物尖叶盐爪爪茎的内生菌。
Arch Microbiol. 2022 Jul 12;204(8):471. doi: 10.1007/s00203-022-03101-7.

本文引用的文献

1
Noncontiguous finished genome sequence and description of Raoultibacter massiliensis gen. nov., sp. nov. and Raoultibacter timonensis sp. nov, two new bacterial species isolated from the human gut.非连续完成的基因组序列和 Raoultibacter massiliensis 属。nov.，sp。nov.和 Raoultibacter timonensis sp。nov 的描述，两种从人类肠道中分离出来的新细菌物种。
Microbiologyopen. 2019 Jun;8(6):e00758. doi: 10.1002/mbo3.758. Epub 2019 Jan 30.
2
Insight of Genus : Ascertaining the Role of Pathogenic and Non-pathogenic Species.属的洞察：确定致病和非致病物种的作用。
Front Microbiol. 2017 Oct 12;8:1937. doi: 10.3389/fmicb.2017.01937. eCollection 2017.
3
Taxonogenomics and description of gen. nov., sp. nov., strain Marseille P2517, a new bacterial genus isolated from the human vagina.
分类基因组学以及新属、新种、马赛P2517菌株的描述，该新细菌属从人类阴道中分离得到。
New Microbes New Infect. 2016 Nov 25;15:94-103. doi: 10.1016/j.nmni.2016.11.006. eCollection 2017 Jan.
4
Culture of previously uncultured members of the human gut microbiota by culturomics.通过培养组学对人类肠道微生物群中以前未培养的成员进行培养。
Nat Microbiol. 2016 Nov 7;1:16203. doi: 10.1038/nmicrobiol.2016.203.
5
Description of sp. nov., a new species within the genus .新物种[属名]sp. nov.的描述。 （注：原文中“sp. nov.”前面的属名缺失，这里按原文格式保留了[属名]）
New Microbes New Infect. 2016 Sep 25;14:85-92. doi: 10.1016/j.nmni.2016.09.008. eCollection 2016 Nov.
6
OrthoANI: An improved algorithm and software for calculating average nucleotide identity.OrthoANI：一种用于计算平均核苷酸一致性的改进算法及软件。
Int J Syst Evol Microbiol. 2016 Feb;66(2):1100-1103. doi: 10.1099/ijsem.0.000760. Epub 2015 Nov 9.
7
From culturomics to taxonomogenomics: A need to change the taxonomy of prokaryotes in clinical microbiology.从文化组学到分类基因组学：临床微生物学中改变原核生物分类法的必要性。
Anaerobe. 2015 Dec;36:73-8. doi: 10.1016/j.anaerobe.2015.10.011. Epub 2015 Oct 27.
8
Complementarity between targeted real-time specific PCR and conventional broad-range 16S rDNA PCR in the syndrome-driven diagnosis of infectious diseases.靶向实时特异性PCR与传统广谱16S rDNA PCR在传染病综合征驱动诊断中的互补性。
Eur J Clin Microbiol Infect Dis. 2015 Mar;34(3):561-70. doi: 10.1007/s10096-014-2263-z. Epub 2014 Oct 28.
9
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
10
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.SOAPdenovo2：一种经验丰富的、内存效率高的短读长从头组装器。
Gigascience. 2012 Dec 27;1(1):18. doi: 10.1186/2047-217X-1-18.