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沉积物阿里迪氏菌新种,一种嗜盐碱的阿里迪氏菌科细菌。

Aliidiomarina sedimenti sp. nov., a haloalkaliphilic bacterium in the family Idiomarinaceae.

作者信息

Shahinpei Azadeh, Amoozegar Mohammad Ali, Shahzadeh Fazeli Seyed Abolhassan, Schumann Peter, Spröer Cathrin, Ventosa Antonio

机构信息

Microorganisms Bank, Iranian Biological Resource Centre (IBRC), ACECR, Tehran, Iran.

Extremophiles Laboratory, Department of Microbiology, Faculty of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, Tehran, Iran.

出版信息

Int J Syst Evol Microbiol. 2017 Jul;67(7):2087-2092. doi: 10.1099/ijsem.0.001772. Epub 2017 Jun 22.

Abstract

A novel Gram-staining-negative straight or curved rod-shaped, moderately halophilic and alkaliphilic bacterium, designated strain GBSy1T, was isolated from a sediment sample from the coastal-marine wetland Gomishan in Iran. GBSy1T was motile, and formed non-pigmented, mucoid colonies. Growth occurred with between 1 and 15 % (w/v) NaCl and the isolate grew optimally with 5 % (w/v) NaCl. The optimum pH and temperature for growth were 8.5 and 34 °C, while the strain was able to grow at pH 7.0-10 and 4-40 °C. On the basis of the results of 16S rRNA gene sequence analysis, GBSy1T was shown to represent a member of the genus Aliidiomarina within the class Gammaproteobacteria, family Idiomarinaceae and showed closest phylogenetic similarity to Aliidiomarina marisCF12-14T (97.7 %). The DNA G+C content of GBSy1T was 51.2 mol%. The cells of GBSy1T contained the isoprenoid ubiquinones Q-8, Q-9 and Q-10 (92, 2 and 2 %, respectively). The major cellular fatty acids of the isolate were iso-C11 : 0 3-OH, iso-C15 : 0, iso-C17 : 0 and iso-C17 : 1ω9c and its polar lipid profile comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and three unknown phospholipids. The level of DNA-DNA relatedness between GBSy1T and Aliidiomarina marisDSM 22154T was 31 %. All these features confirmed the placement of GBSy1T within the genus Aliidiomarina. On the basis of evidence from this study, a novel species of the genus Aliidiomarina, Aliidiomarina sedimenti sp. nov., is proposed, with GBSy1T (=IBRC-M 10764T=CECT 8340T) as the type strain.

摘要

从伊朗戈米山沿海海洋湿地的沉积物样本中分离出一株新型革兰氏染色阴性的直杆状或弯曲杆状、中度嗜盐且嗜碱的细菌,命名为菌株GBSy1T。GBSy1T具有运动性,形成无色素的黏液状菌落。在1%至15%(w/v)的NaCl浓度范围内可生长,该菌株在5%(w/v)的NaCl浓度下生长最佳。生长的最适pH值和温度分别为8.5和34°C,该菌株能够在pH值7.0 - 10和温度4 - 40°C下生长。基于16S rRNA基因序列分析结果,GBSy1T被证明是γ-变形菌纲、艾氏菌科中Aliidiomarina属的一个成员,与Aliidiomarina marisCF12 - 14T显示出最密切的系统发育相似性(97.7%)。GBSy1T的DNA G + C含量为51.2 mol%。GBSy1T的细胞含有类异戊二烯泛醌Q - 8、Q - 9和Q - 10(分别为92%、2%和2%)。该分离株的主要细胞脂肪酸为异-C11 : 0 3-OH、异-C15 : 0、异-C17 : 0和异-C17 : 1ω9c,其极性脂质谱包括磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺和三种未知磷脂。GBSy1T与Aliidiomarina marisDSM 22154T之间的DNA - DNA相关性水平为31%。所有这些特征证实了GBSy1T在Aliidiomarina属中的地位。基于本研究的证据,提出Aliidiomarina属的一个新物种,即沉积物Aliidiomarina(Aliidiomarina sedimenti sp. nov.),以GBSy1T(= IBRC - M 10764T = CECT 8340T)作为模式菌株。

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