Xiang Jie, Reding Katie, Pick Leslie
Entomology Department, University of Maryland; Program in Molecular and Cell Biology, University of Maryland.
Entomology Department, University of Maryland.
J Vis Exp. 2016 Dec 28(118):54976. doi: 10.3791/54976.
Advances in genomics have raised the possibility of probing biodiversity at an unprecedented scale. However, sequence alone will not be informative without tools to study gene function. The development and sharing of detailed protocols for the establishment of new model systems in laboratories, and for tools to carry out functional studies, is thus crucial for leveraging the power of genomics. Coleoptera (beetles) are the largest clade of insects and occupy virtually all types of habitats on the planet. In addition to providing ideal models for fundamental research, studies of beetles can have impacts on pest control as they are often pests of households, agriculture, and food industries. Detailed protocols for rearing and maintenance of D. maculatus laboratory colonies and for carrying out dsRNA-mediated interference in D. maculatus are presented. Both embryonic and parental RNAi procedures-including apparatus set up, preparation, injection, and post-injection recovery-are described. Methods are also presented for analyzing embryonic phenotypes, including viability, patterning defects in hatched larvae, and cuticle preparations for unhatched larvae. These assays, together with in situ hybridization and immunostaining for molecular markers, make D. maculatus an accessible model system for basic and applied research. They further provide useful information for establishing procedures in other emerging insect model systems.
基因组学的进展使得以前所未有的规模探究生物多样性成为可能。然而,如果没有研究基因功能的工具,仅靠序列本身并不能提供有用信息。因此,开发并分享在实验室建立新模型系统以及进行功能研究的工具的详细方案,对于充分利用基因组学的力量至关重要。鞘翅目(甲虫)是昆虫中最大的类群,几乎占据了地球上所有类型的栖息地。除了为基础研究提供理想模型外,对甲虫的研究还可能对害虫防治产生影响,因为它们常常是家庭、农业和食品行业的害虫。本文介绍了黄斑黑腹果蝇实验室种群的饲养和维护以及在黄斑黑腹果蝇中进行双链RNA介导的干扰的详细方案。文中描述了胚胎RNA干扰和亲代RNA干扰程序,包括仪器设置、准备、注射以及注射后的恢复。还介绍了分析胚胎表型的方法,包括活力、孵化幼虫的图案缺陷以及未孵化幼虫的表皮制备。这些检测方法,连同用于分子标记的原位杂交和免疫染色,使黄斑黑腹果蝇成为一个便于进行基础研究和应用研究的模型系统。它们还为在其他新兴昆虫模型系统中建立实验程序提供了有用信息。