• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种通过病毒逃逸导致膜近端外部区域(MPER)暴露的新型HIV-1 gp120-gp41界面抗体的结构与识别

Structure and Recognition of a Novel HIV-1 gp120-gp41 Interface Antibody that Caused MPER Exposure through Viral Escape.

作者信息

Wibmer Constantinos Kurt, Gorman Jason, Ozorowski Gabriel, Bhiman Jinal N, Sheward Daniel J, Elliott Debra H, Rouelle Julie, Smira Ashley, Joyce M Gordon, Ndabambi Nonkululeko, Druz Aliaksandr, Asokan Mangai, Burton Dennis R, Connors Mark, Abdool Karim Salim S, Mascola John R, Robinson James E, Ward Andrew B, Williamson Carolyn, Kwong Peter D, Morris Lynn, Moore Penny L

机构信息

Centre for HIV and STIs, National Institute for Communicable Diseases (NICD), of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.

Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.

出版信息

PLoS Pathog. 2017 Jan 11;13(1):e1006074. doi: 10.1371/journal.ppat.1006074. eCollection 2017 Jan.

DOI:10.1371/journal.ppat.1006074
PMID:
28076415
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5226681/
Abstract

A comprehensive understanding of the regions on HIV-1 envelope trimers targeted by broadly neutralizing antibodies may contribute to rational design of an HIV-1 vaccine. We previously identified a participant in the CAPRISA cohort, CAP248, who developed trimer-specific antibodies capable of neutralizing 60% of heterologous viruses at three years post-infection. Here, we report the isolation by B cell culture of monoclonal antibody CAP248-2B, which targets a novel membrane proximal epitope including elements of gp120 and gp41. Despite low maximum inhibition plateaus, often below 50% inhibitory concentrations, the breadth of CAP248-2B significantly correlated with donor plasma. Site-directed mutagenesis, X-ray crystallography, and negative-stain electron microscopy 3D reconstructions revealed how CAP248-2B recognizes a cleavage-dependent epitope that includes the gp120 C terminus. While this epitope is distinct, it overlapped in parts of gp41 with the epitopes of broadly neutralizing antibodies PGT151, VRC34, 35O22, 3BC315, and 10E8. CAP248-2B has a conformationally variable paratope with an unusually long 19 amino acid light chain third complementarity determining region. Two phenylalanines at the loop apex were predicted by docking and mutagenesis data to interact with the viral membrane. Neutralization by CAP248-2B is not dependent on any single glycan proximal to its epitope, and low neutralization plateaus could not be completely explained by N- or O-linked glycosylation pathway inhibitors, furin co-transfection, or pre-incubation with soluble CD4. Viral escape from CAP248-2B involved a cluster of rare mutations in the gp120-gp41 cleavage sites. Simultaneous introduction of these mutations into heterologous viruses abrogated neutralization by CAP248-2B, but enhanced neutralization sensitivity to 35O22, 4E10, and 10E8 by 10-100-fold. Altogether, this study expands the region of the HIV-1 gp120-gp41 quaternary interface that is a target for broadly neutralizing antibodies and identifies a set of mutations in the gp120 C terminus that exposes the membrane-proximal external region of gp41, with potential utility in HIV vaccine design.

摘要

全面了解广泛中和抗体靶向的HIV-1包膜三聚体区域,可能有助于合理设计HIV-1疫苗。我们之前在CAPRISA队列中鉴定出一名参与者CAP248,其在感染三年后产生了能够中和60%异源病毒的三聚体特异性抗体。在此,我们报告通过B细胞培养分离出单克隆抗体CAP248-2B,它靶向一个新的膜近端表位,包括gp120和gp41的元件。尽管最大抑制平台较低,通常低于50%抑制浓度,但CAP248-2B的广度与供体血浆显著相关。定点诱变、X射线晶体学和负染电子显微镜三维重建揭示了CAP248-2B如何识别一个依赖切割的表位,该表位包括gp120 C末端。虽然这个表位是独特的,但它在gp41的部分区域与广泛中和抗体PGT151、VRC34、35O22、3BC315和10E8的表位重叠。CAP248-2B具有构象可变的互补决定区,其轻链第三互补决定区异常长,有19个氨基酸。通过对接和诱变数据预测,环顶端的两个苯丙氨酸与病毒膜相互作用。CAP248-2B的中和作用不依赖于其表位附近的任何单个聚糖,低中和平台不能完全由N-或O-连接糖基化途径抑制剂、弗林蛋白酶共转染或与可溶性CD4预孵育来解释。病毒对CAP248-2B的逃逸涉及gp120-gp41切割位点的一组罕见突变。将这些突变同时引入异源病毒中可消除CAP248-2B的中和作用,但可使对35O22、4E10和10E8的中和敏感性提高10至100倍。总之,本研究扩展了HIV-1 gp120-gp41四级界面中作为广泛中和抗体靶点的区域,并鉴定出gp120 C末端的一组突变,这些突变暴露了gp41的膜近端外部区域,在HIV疫苗设计中具有潜在用途。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/caabb33ad18d/ppat.1006074.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/6569a1d85076/ppat.1006074.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/7e1faae51c4f/ppat.1006074.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/c5e04944f050/ppat.1006074.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/995fa5d557b2/ppat.1006074.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/e0a5dc0c8e61/ppat.1006074.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/fcd71e6e03ff/ppat.1006074.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/368a9e21b808/ppat.1006074.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/1163d7c4e4f2/ppat.1006074.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/caabb33ad18d/ppat.1006074.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/6569a1d85076/ppat.1006074.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/7e1faae51c4f/ppat.1006074.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/c5e04944f050/ppat.1006074.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/995fa5d557b2/ppat.1006074.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/e0a5dc0c8e61/ppat.1006074.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/fcd71e6e03ff/ppat.1006074.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/368a9e21b808/ppat.1006074.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/1163d7c4e4f2/ppat.1006074.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8654/5226681/caabb33ad18d/ppat.1006074.g009.jpg

相似文献

1
Structure and Recognition of a Novel HIV-1 gp120-gp41 Interface Antibody that Caused MPER Exposure through Viral Escape.一种通过病毒逃逸导致膜近端外部区域(MPER)暴露的新型HIV-1 gp120-gp41界面抗体的结构与识别
PLoS Pathog. 2017 Jan 11;13(1):e1006074. doi: 10.1371/journal.ppat.1006074. eCollection 2017 Jan.
2
HIV type 1 Env precursor cleavage state affects recognition by both neutralizing and nonneutralizing gp41 antibodies.1型人类免疫缺陷病毒包膜前体的切割状态影响中和性和非中和性gp41抗体的识别。
AIDS Res Hum Retroviruses. 2011 Aug;27(8):877-87. doi: 10.1089/AID.2010.0281. Epub 2011 Jan 19.
3
Structural delineation of a quaternary, cleavage-dependent epitope at the gp41-gp120 interface on intact HIV-1 Env trimers.在完整的 HIV-1 Env 三聚体上,gp41-gp120 界面处的一个四分体、依赖裂解的表位的结构描绘。
Immunity. 2014 May 15;40(5):669-80. doi: 10.1016/j.immuni.2014.04.008. Epub 2014 Apr 24.
4
Conformational Epitope-Specific Broadly Neutralizing Plasma Antibodies Obtained from an HIV-1 Clade C-Infected Elite Neutralizer Mediate Autologous Virus Escape through Mutations in the V1 Loop.从一名感染HIV-1 C亚型的精英中和者体内获得的构象表位特异性广泛中和性血浆抗体通过V1环区的突变介导自体病毒逃逸。
J Virol. 2016 Jan 13;90(7):3446-57. doi: 10.1128/JVI.03090-15.
5
Anti-V3/Glycan and Anti-MPER Neutralizing Antibodies, but Not Anti-V2/Glycan Site Antibodies, Are Strongly Associated with Greater Anti-HIV-1 Neutralization Breadth and Potency.抗V3/聚糖和抗膜近端外部区域(MPER)中和抗体,而非抗V2/聚糖位点抗体,与更强的抗HIV-1中和广度和效力密切相关。
J Virol. 2015 May;89(10):5264-75. doi: 10.1128/JVI.00129-15. Epub 2015 Feb 11.
6
Structure of an N276-Dependent HIV-1 Neutralizing Antibody Targeting a Rare V5 Glycan Hole Adjacent to the CD4 Binding Site.靶向CD4结合位点附近一个罕见V5聚糖空洞的N276依赖性HIV-1中和抗体的结构
J Virol. 2016 Oct 28;90(22):10220-10235. doi: 10.1128/JVI.01357-16. Print 2016 Nov 15.
7
Mechanism of HIV-1 neutralization by antibodies targeting a membrane-proximal region of gp41.针对 gp41 膜近端区域的抗体对 HIV-1 的中和作用机制。
J Virol. 2014 Jan;88(2):1249-58. doi: 10.1128/JVI.02664-13. Epub 2013 Nov 13.
8
Direct antibody access to the HIV-1 membrane-proximal external region positively correlates with neutralization sensitivity.直接抗体进入 HIV-1 膜近端外区与中和敏感性呈正相关。
J Virol. 2011 Aug;85(16):8217-26. doi: 10.1128/JVI.00756-11. Epub 2011 Jun 8.
9
Amino Acid Changes in the HIV-1 gp41 Membrane Proximal Region Control Virus Neutralization Sensitivity.HIV-1 gp41 膜近端区的氨基酸变化控制病毒中和敏感性。
EBioMedicine. 2016 Oct;12:196-207. doi: 10.1016/j.ebiom.2016.08.045. Epub 2016 Aug 31.
10
Allosteric modulation of the HIV-1 gp120-gp41 association site by adjacent gp120 variable region 1 (V1) N-glycans linked to neutralization sensitivity.相邻 gp120 可变区 1 (V1) N-糖基化与中和敏感性相关,对 HIV-1 gp120-gp41 结合部位的变构调节。
PLoS Pathog. 2013;9(4):e1003218. doi: 10.1371/journal.ppat.1003218. Epub 2013 Apr 4.

引用本文的文献

1
Structure-Guided Antiviral Peptides Identification Targeting the HIV-1 Integrase.靶向HIV-1整合酶的结构导向抗病毒肽鉴定
ACS Phys Chem Au. 2024 Jul 5;4(5):464-475. doi: 10.1021/acsphyschemau.4c00006. eCollection 2024 Sep 25.
2
Beyond glycan barriers: non-cognate ligands and protein mimicry approaches to elicit broadly neutralizing antibodies for HIV-1.超越聚糖障碍:非同源配体和蛋白质模拟方法引发针对 HIV-1 的广谱中和抗体。
J Biomed Sci. 2024 Aug 21;31(1):83. doi: 10.1186/s12929-024-01073-y.
3
Impact of glycan depletion, glycan debranching and increased glycan charge on HIV-1 neutralization sensitivity and immunogenicity.

本文引用的文献

1
Holes in the Glycan Shield of the Native HIV Envelope Are a Target of Trimer-Elicited Neutralizing Antibodies.天然HIV包膜聚糖屏蔽中的孔洞是三聚体诱导的中和抗体的作用靶点。
Cell Rep. 2016 Aug 30;16(9):2327-38. doi: 10.1016/j.celrep.2016.07.074. Epub 2016 Aug 18.
2
Fusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody.作为中和抗体易损位点的HIV-1融合肽。
Science. 2016 May 13;352(6287):828-33. doi: 10.1126/science.aae0474.
3
Trimeric HIV-1-Env Structures Define Glycan Shields from Clades A, B, and G.三聚体HIV-1包膜结构定义了A、B和G亚型的聚糖屏蔽层。
聚糖耗竭、聚糖去分枝和增加聚糖电荷对 HIV-1 中和敏感性和免疫原性的影响。
Glycobiology. 2024 Sep 30;34(11). doi: 10.1093/glycob/cwae063.
4
Subtle Longitudinal Alterations in Env Sequence Potentiate Differences in Sensitivity to Broadly Neutralizing Antibodies following Acute HIV-1 Subtype C Infection.急性 HIV-1 型 C 亚型感染后,Env 序列的细微纵向改变增强了对广泛中和抗体敏感性的差异。
J Virol. 2022 Dec 21;96(24):e0127022. doi: 10.1128/jvi.01270-22. Epub 2022 Dec 1.
5
Neutralization Sensitivity of HIV-1 CRF07_BC From an Untreated Patient With a Focus on Evolution Over Time.HIV-1 CRF07_BC 对未经治疗的患者的中和敏感性,重点关注随时间的演变。
Front Cell Infect Microbiol. 2022 Mar 17;12:862754. doi: 10.3389/fcimb.2022.862754. eCollection 2022.
6
In silico prediction of HIV-1-host molecular interactions and their directionality.基于计算机的 HIV-1 宿主分子相互作用及其方向性的预测。
PLoS Comput Biol. 2022 Feb 8;18(2):e1009720. doi: 10.1371/journal.pcbi.1009720. eCollection 2022 Feb.
7
Development of Protein- and Peptide-Based HIV Entry Inhibitors Targeting gp120 or gp41.基于蛋白质和肽的 HIV 进入抑制剂的开发,针对 gp120 或 gp41。
Viruses. 2019 Aug 1;11(8):705. doi: 10.3390/v11080705.
8
Conformational Plasticity in the HIV-1 Fusion Peptide Facilitates Recognition by Broadly Neutralizing Antibodies.HIV-1 融合肽的构象可塑性促进了广谱中和抗体的识别。
Cell Host Microbe. 2019 Jun 12;25(6):873-883.e5. doi: 10.1016/j.chom.2019.04.011.
9
Field-Based Affinity Optimization of a Novel Azabicyclohexane Scaffold HIV-1 Entry Inhibitor.基于现场的新型氮杂环己烷 HIV-1 进入抑制剂的亲和力优化。
Molecules. 2019 Apr 22;24(8):1581. doi: 10.3390/molecules24081581.
10
CD4 occupancy triggers sequential pre-fusion conformational states of the HIV-1 envelope trimer with relevance for broadly neutralizing antibody activity.CD4 占有率触发 HIV-1 包膜三聚体的连续预融合构象状态,与广泛中和抗体活性相关。
PLoS Biol. 2019 Jan 16;17(1):e3000114. doi: 10.1371/journal.pbio.3000114. eCollection 2019 Jan.
Cell. 2016 May 5;165(4):813-26. doi: 10.1016/j.cell.2016.04.010. Epub 2016 Apr 21.
4
Composition and Antigenic Effects of Individual Glycan Sites of a Trimeric HIV-1 Envelope Glycoprotein.三聚体HIV-1包膜糖蛋白单个聚糖位点的组成及抗原效应
Cell Rep. 2016 Mar 22;14(11):2695-706. doi: 10.1016/j.celrep.2016.02.058. Epub 2016 Mar 10.
5
Crystallographic Identification of Lipid as an Integral Component of the Epitope of HIV Broadly Neutralizing Antibody 4E10.脂质作为HIV广泛中和抗体4E10表位的组成成分的晶体学鉴定
Immunity. 2016 Jan 19;44(1):21-31. doi: 10.1016/j.immuni.2015.12.001. Epub 2016 Jan 5.
6
Identification of Common Features in Prototype Broadly Neutralizing Antibodies to HIV Envelope V2 Apex to Facilitate Vaccine Design.鉴定针对HIV包膜V2顶端的原型广谱中和抗体的共同特征以促进疫苗设计。
Immunity. 2015 Nov 17;43(5):959-73. doi: 10.1016/j.immuni.2015.10.014.
7
The HIV glycan shield as a target for broadly neutralizing antibodies.作为广泛中和抗体靶点的HIV聚糖屏蔽层
FEBS J. 2015 Dec;282(24):4679-91. doi: 10.1111/febs.13530. Epub 2015 Oct 23.
8
Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike.针对gp41上构象表位的抗体通过使Env刺突不稳定来中和HIV-1。
Nat Commun. 2015 Sep 25;6:8167. doi: 10.1038/ncomms9167.
9
Broadly Neutralizing Antibody 8ANC195 Recognizes Closed and Open States of HIV-1 Env.广谱中和抗体8ANC195识别HIV-1包膜蛋白的封闭态和开放态。
Cell. 2015 Sep 10;162(6):1379-90. doi: 10.1016/j.cell.2015.08.035.
10
Incomplete Neutralization and Deviation from Sigmoidal Neutralization Curves for HIV Broadly Neutralizing Monoclonal Antibodies.HIV广谱中和单克隆抗体的不完全中和及与S形中和曲线的偏差
PLoS Pathog. 2015 Aug 12;11(8):e1005110. doi: 10.1371/journal.ppat.1005110. eCollection 2015 Aug.