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基于内切核糖核酸酶的双组分阻遏系统用于植物中基因表达的严格控制

Endoribonuclease-Based Two-Component Repressor Systems for Tight Gene Expression Control in Plants.

作者信息

Liang Yan, Richardson Sarah, Yan Jingwei, Benites Veronica T, Cheng-Yue Clarabelle, Tran Thu, Mortimer Jenny, Mukhopadhyay Aindrila, Keasling Jay D, Scheller Henrik V, Loqué Dominique

机构信息

Joint BioEnergy Institute, EmeryStation East, 5885 Hollis Street, 4th Floor, Emeryville, California 94608, United States.

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory , 1 Cyclotron Road, Berkeley, California 94720, United States.

出版信息

ACS Synth Biol. 2017 May 19;6(5):806-816. doi: 10.1021/acssynbio.6b00295. Epub 2017 Feb 8.

Abstract

Tight control and multifactorial regulation of gene expression are important challenges in genetic engineering and are critical for the development of regulatory circuits. Meeting these challenges will facilitate transgene expression regulation and support the fine-tuning of metabolic pathways to avoid the accumulation of undesired intermediates. By employing the endoribonuclease Csy4 and its recognition sequence from Pseudomonas aeruginosa and manipulating 5'UTR of mRNA, we developed a two-component expression-repression system to tightly control synthesis of transgene products. We demonstrated that this regulatory device was functional in monocotyledonous and dicotyledonous plant species, and showed that it can be used to repress transgene expression by >400-fold and to synchronize transgene repression. In addition to tissue-specific transgene repression, this system offers stimuli-dependent expression control. Using a bioinformatics approach, we identified 54 orthologous systems from various bacteria, and then validated in planta the activity for a few of those systems, demonstrating the potential diversity of such a two-component repressor system.

摘要

基因表达的严格控制和多因素调控是基因工程中的重要挑战,对于调控回路的发展至关重要。应对这些挑战将有助于转基因表达调控,并支持代谢途径的微调,以避免不需要的中间体积累。通过利用来自铜绿假单胞菌的核糖核酸内切酶Csy4及其识别序列,并操纵mRNA的5'UTR,我们开发了一种双组分表达抑制系统,以严格控制转基因产物的合成。我们证明了这种调控装置在单子叶和双子叶植物物种中具有功能,并表明它可用于将转基因表达抑制400倍以上,并同步转基因抑制。除了组织特异性转基因抑制外,该系统还提供刺激依赖性表达控制。使用生物信息学方法,我们从各种细菌中鉴定出54个直系同源系统,然后在植物中验证了其中一些系统的活性,证明了这种双组分抑制系统的潜在多样性。

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