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海绵威廉姆斯氏菌新种,一种从海洋海绵绿扁海绵中分离出的放线菌。

Williamsia spongiae sp. nov., an actinomycete isolated from the marine sponge Amphimedon viridis.

作者信息

Afonso de Menezes Cláudia Beatriz, Afonso Rafael Sanches, Souza Wallace Rafael de, Parma Márcia, Melo Itamar Soares de, Zucchi Tiago Domingues, Fantinatti-Garboggini Fabiana

机构信息

Centro Pluridisciplinar de Pesquisas Químicas Biológicas e Agrícolas, UNICAMP, Av. Alexandre Cazelatto 999, CEP 13148-218, Paulínia, SP, Brazil.

Programa de Pós-Graduação em Genética e Biologia Molecular, UNICAMP, CP 6109, 13083-970, Campinas, SP, Brazil.

出版信息

Int J Syst Evol Microbiol. 2017 May;67(5):1260-1265. doi: 10.1099/ijsem.0.001796. Epub 2017 May 30.

Abstract

A novel actinobacterium, designated isolate B138T, was isolated from the marine sponge, Amphimedon viridis, which was collected from Praia Guaecá (São Paulo, Brazil), and its taxonomic position was established using data from a polyphasic study. The organism showed a combination of chemotaxonomic and morphological characteristics consistent with its classification in the genus Williamsia and it formed a distinct phyletic line in the Williamsia 16S rRNA gene tree. It was most closely related to Williamsia serinedens DSM 45037T and Williamsia deligens DSM 44902T (99.0 % 16S rRNA gene sequence similarity) and Williamsia maris DSM 44693T (97.5 % 16S rRNA gene sequence similarity), but was distinguished readily from these strains by the low DNA-DNA relatedness values (62.3-64.4 %) and by the discriminatory phenotypic properties. Based on the data obtained, the isolate B138T (=CBMAI 1094T=DSM 46676T) should be classified as the type strain of a novel species of the genus Williamsia, for which the name Williamsia spongiae sp. nov. is proposed.

摘要

从巴西圣保罗瓜埃卡海滩采集的绿色双盘海绵(Amphimedon viridis)中分离出一株新型放线菌,命名为菌株B138T,并通过多相研究数据确定其分类地位。该菌株的化学分类和形态学特征表明其符合威廉姆斯菌属(Williamsia)的分类,并且在威廉姆斯菌属16S rRNA基因树中形成了一个独特的进化分支。它与丝氨酸威廉姆斯菌(Williamsia serinedens)DSM 45037T、产酶威廉姆斯菌(Williamsia deligens)DSM 44902T(16S rRNA基因序列相似度为99.0%)以及海生威廉姆斯菌(Williamsia maris)DSM 44693T(16S rRNA基因序列相似度为97.5%)关系最为密切,但通过低DNA-DNA相关性值(62.3 - 64.4%)和鉴别性表型特征可轻易与这些菌株区分开来。基于所获得的数据,菌株B138T(=CBMAI 1094T=DSM 46676T)应被归类为威廉姆斯菌属一个新物种的模式菌株,为此提议将其命名为海绵威廉姆斯菌(Williamsia spongiae sp. nov.)。

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