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中国烟台一热电厂土壤中分离得到的放线菌 Williamsia soli sp. nov.

Williamsia soli sp. nov., an actinobacterium isolated from soil at a thermal power plant in Yantai, China.

机构信息

Marine College, Shandong University, Weihai, 264209, China.

出版信息

Arch Microbiol. 2021 Dec 29;204(1):102. doi: 10.1007/s00203-021-02714-8.

Abstract

Strain C17, a novel strain belonging to the phylum Actinobacteria, was isolated from a thermal power plant in Yantai, Shandong Province, China. Cells of strain C17 were Gram stain positive, aerobic, pink, non-motile and round with neat edges, showing optimum growth at 28 °C. Phylogenetically, strain C17 was a member of the class Actinobacteria, order Mycobacteriales, family Gordoniaceae. Phylogenetic analysis based on 16S rRNA gene sequence comparisons revealed that the related strains were Williamsia faeni JCM 17784 and Williamsia limnetica KCTC 19981 with pairwise sequence similarity of 98.5% for both strains. According to the draft genome sequence, the DNA G + C content was 64.7%. The average amino acid identity (AAI), average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between genome sequences of strain C17 and the closest type strain W. faeni JCM 17784 were 77.5, 77.9, and 20.7%, respectively. Predominant fatty acids were C (31.7%) and Cω9c (26.8%). The major menaquinone was MK-9. The diagnostic phospholipids were phosphatidylethanolamine (PE), diphosphatidylglycerol (DPG), and phosphatidylinositol (PI). Therefore, the combined phenotypic, chemotaxonomic and phylogenetic data indicated that strain C17 was considered to represent a novel species of the genus Williamsia. Williamsia soli sp. nov. was proposed for strain C17 (= KCTC 49567 = MCCC 1K04355).

摘要

菌株 C17 是一株新型放线菌,分离自中国山东省烟台市的一座火力发电厂。菌株 C17 的细胞革兰氏染色阳性,需氧,呈粉红色,不运动且呈圆形,边缘整齐,最适生长温度为 28°C。系统发育分析表明,菌株 C17 属于放线菌门、放线菌纲、诺卡氏菌目、戈登氏菌科。基于 16S rRNA 基因序列比较的系统发育分析显示,与其亲缘关系最近的菌株为威廉氏菌属的詹氏甲烷球菌 JCM 17784 和威廉氏菌属的 Limnetica 海杆菌 KCTC 19981,两者的序列相似性均为 98.5%。根据基因组草图,其 DNA G+C 含量为 64.7%。菌株 C17 与模式菌株詹氏甲烷球菌 JCM 17784 的平均氨基酸 identity (AAI)、平均核苷酸 identity (ANI) 和数字 DNA-DNA 杂交 (dDDH) 值分别为 77.5%、77.9%和 20.7%。菌株 C17 的主要脂肪酸为 C(31.7%)和 Cω9c(26.8%)。主要的menaquinone 为 MK-9。主要的磷脂为磷脂酰乙醇胺(PE)、双磷脂酰甘油(DPG)和磷脂酰肌醇(PI)。因此,综合表型、化学分类和系统发育数据表明,菌株 C17 代表了一个新的威廉氏菌属种。建议将菌株 C17 命名为威廉氏土壤菌(Williamsia soli)sp. nov.,其模式菌株为 C17(=KCTC 49567=MCCC 1K04355)。

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