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本文引用的文献

1
Structure and dynamics underlying elementary ligand binding events in human pacemaking channels.人类起搏通道中基本配体结合事件的结构与动力学
Elife. 2016 Nov 18;5:e20797. doi: 10.7554/eLife.20797.
2
Monitoring the Waiting Time Sequence of Single Ras GTPase Activation Events Using Liposome Functionalized Zero-Mode Waveguides.使用脂质体功能化零模式波导监测单个Ras GTPase激活事件的等待时间序列
Nano Lett. 2016 Apr 13;16(4):2890-5. doi: 10.1021/acs.nanolett.6b00969. Epub 2016 Mar 30.
3
Single-Molecule Investigation of Initiation Dynamics of an Organometallic Catalyst.单分子研究金属有机催化剂的引发动力学。
J Am Chem Soc. 2016 Mar 23;138(11):3876-83. doi: 10.1021/jacs.6b00357. Epub 2016 Mar 14.
4
Structure and Energetics of Allosteric Regulation of HCN2 Ion Channels by Cyclic Nucleotides.环核苷酸对HCN2离子通道变构调节的结构与能量学
J Biol Chem. 2016 Jan 1;291(1):371-81. doi: 10.1074/jbc.M115.696450. Epub 2015 Nov 11.
5
DNA Origami Nanoantennas with over 5000-fold Fluorescence Enhancement and Single-Molecule Detection at 25 μM.DNA 折纸纳米天线,荧光增强超过 5000 倍,在 25μM 下实现单分子检测。
Nano Lett. 2015 Dec 9;15(12):8354-9. doi: 10.1021/acs.nanolett.5b04045. Epub 2015 Nov 5.
6
Single-molecule methods leap ahead.单分子方法取得了重大进展。
Nat Methods. 2014 Oct;11(10):1015-8. doi: 10.1038/nmeth.3107.
7
Reversible positioning of single molecules inside zero-mode waveguides.单分子在零模波导内的可逆定位
Nano Lett. 2014 Oct 8;14(10):6023-9. doi: 10.1021/nl503134x. Epub 2014 Sep 15.
8
Potential-dependent single molecule blinking dynamics for flavin adenine dinucleotide covalently immobilized in zero-mode waveguide array of working electrodes.在工作电极的零模式波导阵列中共价固定的黄素腺嘌呤二核苷酸的依赖于势的单分子闪烁动力学。
Faraday Discuss. 2013;164:57-69. doi: 10.1039/c3fd00013c.
9
Opportunities and challenges in single-molecule and single-particle fluorescence microscopy for mechanistic studies of chemical reactions.单分子和单粒子荧光显微镜在化学反应机制研究中的机遇与挑战。
Nat Chem. 2013 Dec;5(12):993-9. doi: 10.1038/nchem.1800.
10
Ultra-stable organic fluorophores for single-molecule research.用于单分子研究的超稳定有机荧光团。
Chem Soc Rev. 2014 Feb 21;43(4):1044-56. doi: 10.1039/c3cs60237k.

在毫摩尔浓度下观察单分子动力学。

Observing Single-Molecule Dynamics at Millimolar Concentrations.

机构信息

Department of Neuroscience, University of Wisconsin-Madison, 1111 Highland Ave., Madison, WI, 53705, USA.

Department of Chemistry, University of Wisconsin-Madison, 1101 University Ave., Madison, WI, 53706, USA.

出版信息

Angew Chem Int Ed Engl. 2017 Feb 20;56(9):2399-2402. doi: 10.1002/anie.201612050. Epub 2017 Jan 24.

DOI:10.1002/anie.201612050
PMID:28116856
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6166642/
Abstract

Single-molecule fluorescence microscopy is a powerful tool for revealing chemical dynamics and molecular association mechanisms, but has been limited to low concentrations of fluorescent species and is only suitable for studying high affinity reactions. Here, we combine nanophotonic zero-mode waveguides (ZMWs) with fluorescence resonance energy transfer (FRET) to resolve single-molecule association dynamics at up to millimolar concentrations of fluorescent species. This approach extends the resolution of molecular dynamics to >100-fold higher concentrations, enabling observations at concentrations relevant to biological and chemical processes, and thus making single-molecule techniques applicable to a tremendous range of previously inaccessible molecular targets. We deploy this approach to show that the binding of cGMP to pacemaking ion channels is weakened by a slower internal conformational change.

摘要

单分子荧光显微镜是揭示化学动力学和分子结合机制的有力工具,但一直受到荧光物质浓度低的限制,并且仅适用于研究高亲和力反应。在这里,我们将纳米光子零模波导 (ZMW) 与荧光共振能量转移 (FRET) 结合使用,以在高达毫摩尔浓度的荧光物质下解析单分子结合动力学。这种方法将分子动力学的分辨率扩展到高出 100 倍的浓度,使在与生物和化学过程相关的浓度下进行观察成为可能,从而使单分子技术适用于以前无法企及的大量分子靶标。我们采用这种方法表明,cGMP 与起搏离子通道的结合因内部构象变化较慢而减弱。