Zhang Lichi, Wang Qian, Gao Yaozong, Wu Guorong, Shen Dinggang
Med-X Research Institute, School of Biomedical Engineering, Shanghai Jiao Tong University.
Department of Radiology and BRIC, University of North Carolina at Chapel Hill; Department of Computer Science, University of North Carolina at Chapel Hill.
Neurocomputing (Amst). 2017 Mar 15;229:3-12. doi: 10.1016/j.neucom.2016.05.082. Epub 2016 Jun 7.
Automatic labeling of the hippocampus in brain MR images is highly demanded, as it has played an important role in imaging-based brain studies. However, accurate labeling of the hippocampus is still challenging, partially due to the ambiguous intensity boundary between the hippocampus and surrounding anatomies. In this paper, we propose a concatenated set of spatially-localized random forests for multi-atlas-based hippocampus labeling of adult/infant brain MR images. The contribution in our work is two-fold. , each forest classifier is trained to label just a specific sub-region of the hippocampus, thus enhancing the labeling accuracy. , a novel forest selection strategy is proposed, such that each voxel in the test image can automatically select a set of optimal forests, and then dynamically fuses their respective outputs for determining the final label. , we enhance the spatially-localized random forests with the aid of the auto-context strategy. In this way, our proposed learning framework can gradually refine the tentative labeling result for better performance. Experiments show that, regarding the large datasets of both adult and infant brain MR images, our method owns satisfactory scalability by segmenting the hippocampus accurately and efficiently.
脑磁共振成像(MR)图像中海马体的自动标注需求迫切,因为它在基于成像的脑研究中发挥了重要作用。然而,海马体的精确标注仍然具有挑战性,部分原因是海马体与周围解剖结构之间的强度边界模糊。在本文中,我们提出了一组串联的空间局部随机森林,用于基于多图谱的成人/婴儿脑MR图像海马体标注。我们工作的贡献有两方面。其一,每个森林分类器被训练用于仅标注海马体的特定子区域,从而提高标注准确性。其二,提出了一种新颖的森林选择策略,使得测试图像中的每个体素能够自动选择一组最优森林,然后动态融合它们各自的输出以确定最终标签。此外,我们借助自动上下文策略增强空间局部随机森林。通过这种方式,我们提出的学习框架可以逐步细化初步标注结果以获得更好的性能。实验表明,对于成人和婴儿脑MR图像的大型数据集,我们的方法通过准确高效地分割海马体具有令人满意的可扩展性。