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用于β-内酰胺类抗生素评估的平板菌株:它们的表型和基因型特征

Panel strain of for beta-lactam antibiotic evaluation: their phenotypic and genotypic characterization.

作者信息

Dsouza Roshan, Pinto Naina Adren, Hwang InSik, Cho YoungLag, Yong Dongeun, Choi Jongrak, Lee Kyungwon, Chong Yunsop

机构信息

Department of Laboratory Medicine and Research Institute of Bacterial Resistance, Yonsei University College of Medicine , Seoul , South Korea.

Department of Laboratory Medicine and Research Institute of Bacterial Resistance, Yonsei University College of Medicine, Seoul, South Korea; Brain Korea 21 PLUS Project for Medical Science, Yonsei University, Seoul, South Korea.

出版信息

PeerJ. 2017 Jan 19;5:e2896. doi: 10.7717/peerj.2896. eCollection 2017.

Abstract

is responsible for numerous infections caused in hospitals, leading to mortality and morbidity. It has been evolving as a multi-drug resistant pathogen, acquiring multiple resistances such as such as horizontal gene transfer, transposon-mediated insertions or change in outer membrane permeability. Therefore, constant efforts are being carried out to control the infections using various antibiotic therapies. Considering the severity of the acquired resistance, we developed a panel of strains of expressing different resistance profiles such as high-level penicillinase and AmpC production, extended spectrum beta-lactamases and carbapenemases. Bacterial strains expressing different resistance phenotypes were collected and examined for resistance genes, mutations and porin alterations contributing to the detected phenotypes. Using the Massive parallel sequencing (MPS) technology we have constructed and genotypically characterized the panel strains to elucidate the multidrug resistance. These panel strains can be used in the clinical laboratory as standard reference strains. In addition, these strains could be significant in the field of pharmaceuticals for the antibiotic drug testing to verify its efficiency on pathogens expressing various  resistances.

摘要

它导致医院内发生众多感染,造成死亡和发病。它已演变成一种多重耐药病原体,通过水平基因转移、转座子介导的插入或外膜通透性改变等方式获得多种耐药性。因此,人们一直在不断努力,使用各种抗生素疗法来控制感染。考虑到获得性耐药的严重性,我们构建了一组表达不同耐药谱的菌株,如高水平青霉素酶和AmpC产生、超广谱β-内酰胺酶和碳青霉烯酶。收集表达不同耐药表型的细菌菌株,检测导致所检测表型的耐药基因、突变和孔蛋白改变。我们使用大规模平行测序(MPS)技术构建了这些菌株并对其进行基因分型,以阐明多重耐药性。这些菌株可在临床实验室用作标准参考菌株。此外,这些菌株在制药领域对于抗生素药物测试以验证其对表达各种耐药性的病原体的有效性可能具有重要意义。

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