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模拟三方药物外排泵原型:对大分子成分的结构和功能研究揭示的内容远超其名称所暗示的。

Modeling the Tripartite Drug Efflux Pump Archetype: Structural and Functional Studies of the Macromolecular Constituents Reveal More Than Their Names Imply.

作者信息

Elkins C A, Beenken K E

出版信息

J Chemother. 2005 Dec 1;17(6):581-592. doi: 10.1179/joc.2006.17.6.581.

DOI:10.1179/joc.2006.17.6.581
PMID:28136134
Abstract

It is a remarkable age in molecular biology when one can argue that our current understanding of a process is influenced as much by structural studies as it is by genetic and physiological manipulations. This statement is particularly poignant with membrane proteins for which structural knowledge has been long impeded by the inability to easily obtain crystal structures in a lipid matrix. Thus, several highresolution structures of the components comprising tripartite multidrug efflux pumps from Escherichia coli and Pseudomonas aeruginosa are now available and were received with much acclaim over ever-evolving crystal structures of soluble, aqueous proteins. These structures, in conjunction with functional mutagenesis studies, have provided insight into substrate capture and binding domains and redefined the potential interactions between individual pump constituents. However, correct assembly of the components is still a matter of debate as is the functional contribution of each to the translocation of drug substrates over long distances spanning the Gram-negative cell envelope.

摘要

在分子生物学领域,这是一个非凡的时代,人们可以认为,我们目前对一个过程的理解,受到结构研究的影响与受到基因和生理操作的影响一样大。对于膜蛋白来说,这种说法尤为贴切,因为长期以来,由于无法在脂质基质中轻松获得晶体结构,其结构知识一直受到阻碍。因此,现在已经有了来自大肠杆菌和铜绿假单胞菌的三方多药外排泵组成成分的几个高分辨率结构,并且这些结构受到了比不断发展的可溶性水性蛋白质晶体结构更多的赞誉。这些结构,结合功能诱变研究,为底物捕获和结合结构域提供了见解,并重新定义了各个泵组件之间的潜在相互作用。然而,组件的正确组装仍然是一个有争议的问题,每个组件对跨越革兰氏阴性细胞膜的长距离药物底物转运的功能贡献也是如此。

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Modeling the Tripartite Drug Efflux Pump Archetype: Structural and Functional Studies of the Macromolecular Constituents Reveal More Than Their Names Imply.模拟三方药物外排泵原型:对大分子成分的结构和功能研究揭示的内容远超其名称所暗示的。
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引用本文的文献

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Single nucleotide polymorphism analysis of the major tripartite multidrug efflux pump of Escherichia coli: functional conservation in disparate animal reservoirs despite exposure to antimicrobial chemotherapy.大肠杆菌主要三组分多药外排泵的单核苷酸多态性分析:尽管暴露于抗菌化疗药物中,但在不同的动物宿主中仍具有功能保守性。
Antimicrob Agents Chemother. 2010 Mar;54(3):1007-15. doi: 10.1128/AAC.01126-09. Epub 2009 Dec 28.
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Structure, function, and evolution of bacterial ATP-binding cassette systems.细菌ATP结合盒转运系统的结构、功能及进化
Microbiol Mol Biol Rev. 2008 Jun;72(2):317-64, table of contents. doi: 10.1128/MMBR.00031-07.