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小麦的古历史造就了不对称的基因组进化。

Wheat paleohistory created asymmetrical genomic evolution.

作者信息

Pont Caroline, Salse Jérôme

机构信息

INRA/UCA UMR 1095 GDEC 'Génétique, Diversité et Ecophysiologie des Céréales', Laboratory PaleoEVO 'Paleogenomics & Evolution', 5 chemin de Beaulieu, 63100 Clermont Ferrand, France.

INRA/UCA UMR 1095 GDEC 'Génétique, Diversité et Ecophysiologie des Céréales', Laboratory PaleoEVO 'Paleogenomics & Evolution', 5 chemin de Beaulieu, 63100 Clermont Ferrand, France*.

出版信息

Curr Opin Plant Biol. 2017 Apr;36:29-37. doi: 10.1016/j.pbi.2017.01.001. Epub 2017 Feb 7.

Abstract

Following the triplication reported in Brassiceae ∼10million years ago, and at the basis of rosids ∼100million years ago, bias in organization and regulation, known as subgenome dominance, has been reported between the three post-polyploidy compartments referenced to as less fractionated (LF), medium fractionated (MF1) and more fractionated (MF2), that have been proposed to derive from an hexaploidization event involving ancestors of 7-14-21 chromosomes. Modern bread wheat experienced similar paleohistory during the last half million year of evolution opening a new hypothesis where the wheat genome is at the earliest stages on the road of diploidization through subgenome dominance driving asymmetry in gene content, gene expression abundance, transposable element content as dynamics and epigenetic control between the A, B and D subgenomes.

摘要

在约1000万年前的十字花科发生三倍化之后,以及约1亿年前蔷薇类植物的基础上,在三个多倍体后区室(分别称为低分化区室(LF)、中等分化区室(MF1)和高分化区室(MF2))之间,已经报道了组织和调控上的偏差,即亚基因组优势,这些区室被认为源自涉及7 - 14 - 21条染色体祖先的六倍体化事件。现代面包小麦在过去50万年的进化过程中经历了类似的古历史,这开启了一个新的假说,即小麦基因组正处于通过亚基因组优势推动A、B和D亚基因组之间基因含量、基因表达丰度、转座元件含量动态以及表观遗传控制的不对称性而走向二倍体化的最早阶段。

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