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小麦耐虫基因座的编码与非编码特征及其在谷物基因组同源物中的比较分析。

Comparative Analysis of Coding and Non-Coding Features within Insect Tolerance Loci in Wheat with Their Homologs in Cereal Genomes.

机构信息

Molecular Biology, Genetics and Bioengineering Program, Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul 34956, Turkey.

Montana BioAgriculture, Inc., Missoula, MT 59802, USA.

出版信息

Int J Mol Sci. 2021 Nov 16;22(22):12349. doi: 10.3390/ijms222212349.

Abstract

Food insecurity and malnutrition have reached critical levels with increased human population, climate fluctuations, water shortage; therefore, higher-yielding crops are in the spotlight of numerous studies. Abiotic factors affect the yield of staple food crops; among all, wheat stem sawfly ( Norton) and orange wheat blossom midge () are two of the most economically and agronomically harmful insect pests which cause yield loss in cereals, especially in wheat in North America. There is no effective strategy for suppressing this pest damage yet, and only the plants with intrinsic tolerance mechanisms such as solid stem phenotypes for and antixenosis and/or antibiosis mechanisms for can limit damage. A major QTL and a causal gene for resistance were previously identified in wheat, and 3 major QTLs and a causal gene for resistance. Here, we present a comparative analysis of coding and non-coding features of these loci of wheat across important cereal crops, barley, rye, oat, and rice. This research paves the way for our cloning and editing of additional and tolerance gene(s), proteins, and metabolites.

摘要

粮食不安全和营养不良问题随着人口增长、气候波动和水资源短缺而达到临界点,因此,更高产的作物成为众多研究的焦点。非生物因素会影响主食作物的产量;在所有这些因素中,麦茎蜂(Norton)和橘黄吸浆虫()是两种最具经济和农业危害性的害虫,它们会导致谷物,尤其是北美的小麦减产。目前还没有有效的策略来抑制这种虫害,只有具有内在耐受机制的植物,如结实的茎表型对具有抗生性和/或抗生性机制对具有抗生性,才能限制其危害。以前在小麦中已经鉴定出一个与抗 有关的主效 QTL 和一个因果基因,以及 3 个与抗 有关的主效 QTL 和一个因果基因。在这里,我们对小麦、大麦、黑麦、燕麦和水稻等重要谷类作物中这些基因座的编码和非编码特征进行了比较分析。这项研究为我们克隆和编辑更多的 和 耐受基因、蛋白和代谢物铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/18ca/8623949/855a4cb50032/ijms-22-12349-g001.jpg

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