Suppr超能文献

使用RT-SIBA®进行呼吸道合胞病毒检测的快速灵敏实时检测法。

Rapid and sensitive real-time assay for the detection of respiratory syncytial virus using RT-SIBA®.

作者信息

Eboigbodin Kevin E, Moilanen Kirsi, Elf Sonja, Hoser Mark

机构信息

Research and Development, Orion Diagnostica Oy, P. O. BOX 83, FI-02101, Espoo, Finland.

Molecular Biology, GeneForm Technologies, Broadstairs, UK.

出版信息

BMC Infect Dis. 2017 Feb 10;17(1):134. doi: 10.1186/s12879-017-2227-x.

Abstract

BACKGROUND

Respiratory syncytial virus (RSV) is one of the most common causes of respiratory tract infections among young children and the elderly. Timely and accurate diagnosis of respiratory tract infections improves patient care and minimizes unnecessary prescriptions of antibiotics. We sought to develop a rapid nucleic acid tests for the detection of RSV within minutes, while retaining the high sensitivity achieved with RT-PCR.

METHODS

We developed and evaluated a reverse transcription isothermal nucleic acid amplification method, reverse transcription strand invasion based amplification (RT-SIBA), for the rapid detection of RSV.

RESULTS

The developed RT-SIBA assay showed good sensitivity by detecting as few as 10 copies of RSV RNA within 20 min compared with reverse transcription polymerase chain reaction, which took approximately 2 h. The performance of the RT-SIBA RSV assay was further investigated using nasopharyngeal swab specimens. The RT-SIBA assay had a sensitivity of 100% (25/25) and a specificity of 100% (15/15).

CONCLUSION

RT-SIBA did not require highly purified RNA for the rapid detection of RSV and was therefore compatible with rapid specimen processing methods. This reduces the complexity of specimen preparation and further shortens the total amount of time needed to detect RSV in clinical specimens. The developed RT-SIBA assay for RSV could be a useful tool for prompt management of this infection.

摘要

背景

呼吸道合胞病毒(RSV)是幼儿和老年人呼吸道感染最常见的病因之一。及时准确地诊断呼吸道感染可改善患者护理,并尽量减少不必要的抗生素处方。我们试图开发一种能在几分钟内检测RSV的快速核酸检测方法,同时保持逆转录聚合酶链反应(RT-PCR)所具有的高灵敏度。

方法

我们开发并评估了一种用于快速检测RSV的逆转录等温核酸扩增方法,即基于链侵入的逆转录扩增法(RT-SIBA)。

结果

与耗时约2小时的RT-PCR相比,所开发的RT-SIBA检测方法在20分钟内就能检测到低至10拷贝的RSV RNA,显示出良好的灵敏度。使用鼻咽拭子标本进一步研究了RT-SIBA RSV检测方法的性能。RT-SIBA检测方法的灵敏度为100%(25/25),特异性为100%(15/15)。

结论

RT-SIBA在快速检测RSV时不需要高度纯化的RNA,因此与快速标本处理方法兼容。这降低了标本制备的复杂性,并进一步缩短了临床标本中检测RSV所需的总时间。所开发的用于检测RSV的RT-SIBA检测方法可能是及时管理这种感染的有用工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7735/5301360/0982ea3370e5/12879_2017_2227_Fig1_HTML.jpg

相似文献

1
Rapid and sensitive real-time assay for the detection of respiratory syncytial virus using RT-SIBA®.
BMC Infect Dis. 2017 Feb 10;17(1):134. doi: 10.1186/s12879-017-2227-x.
6
7
An Ultra-Rapid Real-Time RT-PCR Method Using PCR1100 for Detecting Human Orthopneumovirus.
Jpn J Infect Dis. 2020 Nov 24;73(6):465-468. doi: 10.7883/yoken.JJID.2020.182. Epub 2020 May 29.

引用本文的文献

1
Respiratory syncytial virus: A review of current basic and clinical knowledge.
Qatar Med J. 2024 Dec 24;2024(4):56. doi: 10.5339/qmj.2024.56. eCollection 2024.
3
Manually pressurized droplet digital PCR chip for rapid SARS-CoV-2 diagnostics.
Biomicrofluidics. 2024 Feb 27;18(1):014106. doi: 10.1063/5.0180394. eCollection 2024 Jan.
4
Exosomal Composition, Biogenesis and Profiling Using Point-of-Care Diagnostics-Implications for Cardiovascular Disease.
Front Cell Dev Biol. 2022 Jun 1;10:853451. doi: 10.3389/fcell.2022.853451. eCollection 2022.
7
Recent advances in the detection of respiratory virus infection in humans.
J Med Virol. 2020 Apr;92(4):408-417. doi: 10.1002/jmv.25674. Epub 2020 Feb 4.
8
Detection of human rhinoviruses by reverse transcription strand invasion based amplification method (RT-SIBA).
J Virol Methods. 2019 Jan;263:75-80. doi: 10.1016/j.jviromet.2018.10.015. Epub 2018 Oct 19.
9
Molecular Detection of Streptococcus pyogenes by Strand Invasion Based Amplification Assay.
Mol Diagn Ther. 2018 Oct;22(5):595-602. doi: 10.1007/s40291-018-0346-8.
10
Development and evaluation of a rapid nucleic acid amplification method to detect influenza A and B viruses in human respiratory specimens.
Diagn Microbiol Infect Dis. 2018 Sep;92(1):37-42. doi: 10.1016/j.diagmicrobio.2018.04.006. Epub 2018 Apr 18.

本文引用的文献

1
Novel portable platform for molecular detection of toxigenic Clostridium difficile in faeces: a diagnostic accuracy study.
Eur J Clin Microbiol Infect Dis. 2017 May;36(5):783-789. doi: 10.1007/s10096-016-2860-0. Epub 2016 Dec 17.
2
Rapid molecular diagnostic test for Zika virus with low demands on sample preparation and instrumentation.
Diagn Microbiol Infect Dis. 2016 Dec;86(4):369-371. doi: 10.1016/j.diagmicrobio.2016.08.027. Epub 2016 Sep 2.
3
Reverse transcription strand invasion based amplification (RT-SIBA): a method for rapid detection of influenza A and B.
Appl Microbiol Biotechnol. 2016 Jun;100(12):5559-67. doi: 10.1007/s00253-016-7491-y. Epub 2016 Apr 11.
4
Performance evaluation of four rapid antigen tests for the detection of Respiratory syncytial virus.
J Med Virol. 2016 Oct;88(10):1720-4. doi: 10.1002/jmv.24522. Epub 2016 Mar 28.
6
RSV infections: State of the art.
Cleve Clin J Med. 2015 Nov;82(11 Suppl 1):S13-8. doi: 10.3949/ccjm.82.s1.03.
10
Respiratory syncytial virus infection and bronchiolitis.
Pediatr Rev. 2014 Dec;35(12):519-30. doi: 10.1542/pir.35-12-519.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验