Sun Lina, Sun Jingchun, Xu Qinzeng, Li Xiaoni, Zhang Libin, Yang Hongsheng
Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China.
Key Laboratory of Marine Ecology and Environmental Science and Engineering, First Institute of Oceanography, State Oceanic Administration, Qingdao, China.
Comp Biochem Physiol Part D Genomics Proteomics. 2017 Jun;22:32-38. doi: 10.1016/j.cbd.2017.02.003. Epub 2017 Feb 4.
Sea cucumbers are excellent models for studying organ regeneration due to their striking capacity to regenerate most of their viscera after evisceration. In this study, we applied NMR-based metabolomics to determine the metabolite changes that occur during the process of intestine regeneration in sea cucumbers. Partial least-squares discriminant analysis showed that there was significant differences in metabolism between regenerative intestines at 3, 7, and 14days post evisceration (dpe) and normal intestines. Changes in the concentration of 13 metabolites related to regeneration were observed and analyzed. These metabolites included leucine, isoleucine, valine, arginine, glutamate, hypotaurine, dimethylamine, N,N-dimethylglycine, betaine, taurine, inosine, homarine, and histidine. Three important genes (betaine-aldehyde dehydrogenase, betaine-homocysteine S-methyltransferase 1, and dimethylglycine dehydrogenase) were differentially expressed to regulate the levels of betaine and N,N-dimethylglycine during intestine regeneration. These results provide an important basis for studying regenerative mechanisms and developing regenerative matrixes.
海参是研究器官再生的优秀模型,因为它们具有在去内脏后惊人的能力来再生大部分内脏。在本研究中,我们应用基于核磁共振的代谢组学来确定海参肠道再生过程中发生的代谢物变化。偏最小二乘判别分析表明,去内脏后3天、7天和14天的再生肠道与正常肠道之间在代谢方面存在显著差异。观察并分析了13种与再生相关的代谢物浓度变化。这些代谢物包括亮氨酸、异亮氨酸、缬氨酸、精氨酸、谷氨酸、亚牛磺酸、二甲胺、N,N-二甲基甘氨酸、甜菜碱、牛磺酸、次黄嘌呤、高甜菜碱和组氨酸。三个重要基因(甜菜碱醛脱氢酶、甜菜碱-同型半胱氨酸S-甲基转移酶1和二甲基甘氨酸脱氢酶)在肠道再生过程中差异表达,以调节甜菜碱和N,N-二甲基甘氨酸的水平。这些结果为研究再生机制和开发再生基质提供了重要依据。