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马西利亚不可食菌属，新属，新种，一种从一名严重营养不良婴儿的肠道微生物群中分离出的新细菌物种。

Inediibacterium massiliense gen. nov., sp. nov., a new bacterial species isolated from the gut microbiota of a severely malnourished infant.

作者信息

Alou Maryam Tidjani, Rathored Jaishriram, Michelle Caroline, Dubourg Gregory, Andrieu Claudia, Armstrong Nicholas, Sokhna Cheikh, Diallo Aldiouma, Raoult Didier, Fournier Pierre-Edouard

机构信息

URMITE, Aix Marseille Université, UM63, CNRS 7278, IRD 198, INSERM 1095, IHU - Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13005, Marseille, France.

Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes IRD 198, CNRS 7278, Aix-Marseille Université, Marseille, France.

出版信息

Antonie Van Leeuwenhoek. 2017 Jun;110(6):737-750. doi: 10.1007/s10482-017-0843-5. Epub 2017 Feb 11.

DOI:10.1007/s10482-017-0843-5
PMID:28190153
Abstract

A novel strain, Mt12 (=CSUR P1907 = DSM 100590), was isolated from the fecal sample of a 7-month-old girl from Senegal afflicted with severe acute malnutrition. This bacterium is a strictly anaerobic, spore-forming Gram-stain positive bacillus. The major cellular fatty acid was identified as tetradecanoic acid. Its 16S rRNA gene sequence exhibited 94.9% similarity with that of Crassaminicella profunda strain Ra1766H, currently the closest species with a validly published name. The draft genome of strain Mt12 is 3,497,275-bp long with a 30.45% of G+C content. 3397 genes were predicted, including 3268 protein-coding genes and 129 RNAs, including eight 16S rRNAs. Genomic comparison with closely related species with an available genome showed a lower quantitative genomic content. The phylogenetic analysis alongside the dDDH values under 30% and phenotypic characteristics suggest that strain Mt12 represents a new genus within the family Clostridiaceae, for which the name Inediibacterium massiliense gen. nov., sp. nov. is proposed.

摘要

从一名患有严重急性营养不良的塞内加尔7个月大女童的粪便样本中分离出一种新型菌株Mt12（=CSUR P1907 = DSM 100590）。该细菌是一种严格厌氧、形成芽孢的革兰氏染色阳性杆菌。主要细胞脂肪酸被鉴定为十四烷酸。其16S rRNA基因序列与目前有效发表名称的最接近物种深部厚壁菌Crassaminicella profunda菌株Ra1766H的序列相似度为94.9%。菌株Mt12的基因组草图长度为3,497,275 bp，G+C含量为30.45%。预测有3397个基因，包括3268个蛋白质编码基因和129个RNA，其中包括8个16S rRNA。与具有可用基因组的密切相关物种进行基因组比较，结果显示基因组含量较低。系统发育分析以及低于30%的dDDH值和表型特征表明，菌株Mt12代表梭菌科中的一个新属，为此提出新属名Massiliense不食菌属（Inediibacterium），新种名Massiliense不食菌（Inediibacterium massiliense）。

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