Chapman Jessica R, Balasubramanian Divya, Tam Kayan, Askenazi Manor, Copin Richard, Shopsin Bo, Torres Victor J, Ueberheide Beatrix M
From the ‡Proteomics Laboratory.
§Department of Microbiology.
Mol Cell Proteomics. 2017 Apr;16(4 suppl 1):S15-S28. doi: 10.1074/mcp.O116.065581. Epub 2017 Feb 14.
() is the leading cause of a variety of bacterial infections ranging from superficial skin infections to invasive and life threatening diseases such as septic bacteremia, necrotizing pneumonia, and endocarditis. The success of as a human pathogen is contributed to its ability to adapt to different environments by changing expression, production, or secretion of virulence factors. Although immune evasion is well-studied, the regulation of virulence factors under different nutrient and growth conditions is still not well understood. Here, we used label-free quantitative mass spectrometry to quantify and compare the exoproteins ( exoproteomes) of master regulator mutants or established reference strains. Different environmental conditions were addressed by growing the bacteria in rich or minimal media at different phases of growth. We observed clear differences in the composition of the exoproteomes depending on the genetic background or growth conditions. The relative abundance of cytotoxins determined in our study correlated well with differences in cytotoxicity measured by lysis of human neutrophils. Our findings demonstrate that label-free quantitative mass spectrometry is a versatile tool for predicting the virulence of bacterial strains and highlights the importance of the experimental design for studies. Furthermore, the results indicate that label-free proteomics can be used to cluster isolates into groups with similar virulence properties, highlighting the power of label-free quantitative mass spectrometry to distinguish strains.
()是多种细菌感染的主要原因,范围从浅表皮肤感染到侵袭性和危及生命的疾病,如败血性菌血症、坏死性肺炎和心内膜炎。作为一种人类病原体取得成功,得益于其通过改变毒力因子的表达、产生或分泌来适应不同环境的能力。尽管对()的免疫逃避已有充分研究,但在不同营养和生长条件下毒力因子的调控仍未得到很好的理解。在此,我们使用无标记定量质谱法来定量和比较主调节子突变体或既定参考菌株的()外蛋白(外蛋白质组)。通过在丰富或基本培养基中于不同生长阶段培养细菌来模拟不同的环境条件。我们观察到,根据遗传背景或生长条件,外蛋白质组的组成存在明显差异。我们研究中测定的细胞毒素相对丰度与通过人中性粒细胞裂解测定的细胞毒性差异密切相关。我们的研究结果表明,无标记定量质谱法是预测细菌菌株毒力的一种通用工具,并突出了实验设计对()研究的重要性。此外,结果表明无标记蛋白质组学可用于将分离株聚类为具有相似毒力特性的组,凸显了无标记定量质谱法区分()菌株的能力。