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菜豆对白粉病抗性的Meta-QTL

Meta-QTL for resistance to white mold in common bean.

作者信息

Vasconcellos Renato C C, Oraguzie O Blessing, Soler Alvaro, Arkwazee Haidar, Myers James R, Ferreira Juan J, Song Qijian, McClean Phil, Miklas Phillip N

机构信息

Department of Biology, Federal University of Lavras, Lavras, Minas Gerais, Brazil.

Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, Washington, United States of America.

出版信息

PLoS One. 2017 Feb 15;12(2):e0171685. doi: 10.1371/journal.pone.0171685. eCollection 2017.

Abstract

White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Our objective was to identify meta-QTL conditioning partial resistance to white mold from individual QTL identified across multiple populations and environments. The physical positions for 37 individual QTL were identified across 14 recombinant inbred bi-parental populations (six new, three re-genotyped, and five from the literature). A meta-QTL analysis of the 37 QTL was conducted using the genetic linkage map of Stampede x Red Hawk population as the reference. The 37 QTL condensed into 17 named loci (12 previously named and five new) of which nine were defined as meta-QTL WM1.1, WM2.2, WM3.1, WM5.4, WM6.2, WM7.1, WM7.4, WM7.5, and WM8.3. The nine meta-QTL had confidence intervals ranging from 0.65 to 9.41 Mb. Candidate genes shown to express under S. sclerotiorum infection in other studies, including cell wall receptor kinase, COI1, ethylene responsive transcription factor, peroxidase, and MYB transcription factor, were found within the confidence interval for five of the meta-QTL. The nine meta-QTL are recommended as potential targets for MAS for partial resistance to white mold in common bean.

摘要

由核盘菌(Sclerotinia sclerotiorum (Lib.) de Bary)引起的白霉病是一种限制全球菜豆生产和品质的主要病害。寄主-病原体相互作用复杂,寄主中的部分抗性作为一种低至中等遗传力的数量性状遗传。我们的目标是从多个群体和环境中鉴定出的单个QTL中识别出调控对白霉病部分抗性的元QTL。在14个重组自交双亲群体(6个新群体、3个重新基因分型群体和5个文献报道群体)中确定了37个单个QTL的物理位置。以Stampede×Red Hawk群体的遗传连锁图谱为参考,对这37个QTL进行了元QTL分析。这37个QTL浓缩为17个命名位点(12个先前已命名,5个新命名),其中9个被定义为元QTL WM1.1、WM2.2、WM3.1、WM5.4、WM6.2、WM7.1、WM7.4、WM7.5和WM8.3。这9个元QTL的置信区间为0.65至9.41 Mb。在其他研究中显示在核盘菌感染下表达的候选基因,包括细胞壁受体激酶、COI1、乙烯响应转录因子、过氧化物酶和MYB转录因子,在5个元QTL的置信区间内被发现。这9个元QTL被推荐作为菜豆对白霉病部分抗性的分子标记辅助选择(MAS)的潜在目标。

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