Department of Chemistry, Mississippi State University, Mississippi State, MS 39762, United States.
Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824-4320, United States.
Biochim Biophys Acta Gen Subj. 2017 May;1861(5 Pt A):987-994. doi: 10.1016/j.bbagen.2017.02.018. Epub 2017 Feb 15.
TauD is a nonheme iron(II) and α-ketoglutarate (αKG) dependent dioxygenase, and a member of a broader family of enzymes that oxidatively decarboxylate αKG to succinate and carbon dioxide thereby activating O to perform a range of oxidation reactions. However before O activation can occur, these enzymes bind both substrate and cofactor in an effective manner. Here the thermodynamics associated with substrate and cofactor binding to FeTauD are explored.
Thermal denaturation of TauD and its enzyme-taurine, enzyme-αKG, and enzyme-taurine-αKG complexes are explored using circular dichroism (CD) spectroscopy and differential scanning calorimetry (DSC).
Taurine binding is endothermic (+26kcal/mol) and entropically driven that includes burial of hydrophobic surfaces to close the lid domain. Binding of αKG is enthalpically favorable and shows cooperativity with taurine binding, where the change in enthalpy associated with αKG binding (δΔH) increases from -30.1kcal/mol when binding to FeTauD to -65.2kcal/mol when binding to the FeTauD-taurine complex.
The intermolecular interactions that govern taurine and αKG binding impact the global stability of TauD and its complexes, with clear and dramatic cooperativity between substrate and cofactor.
Thermal denaturation of TauD and its enzyme-taurine, enzyme-αKG, and enzyme-taurine-αKG complexes each exhibited increased temperature stability over the free enzyme. Through deconvolution of the energetic profiles for all species studied, a thermodynamic cycle was generated that shows significant cooperativity between substrate and cofactor binding which continues to clarity the events leading up O activation.
TauD 是一种非血红素铁(II)和 α-酮戊二酸(αKG)依赖性双氧酶,也是更广泛的酶家族的成员,该家族的酶通过氧化脱羧将 αKG 氧化为琥珀酸和二氧化碳,从而激活氧来进行一系列氧化反应。然而,在氧激活发生之前,这些酶以有效的方式结合底物和辅因子。本文探讨了 TauD 结合铁和辅因子的热力学。
使用圆二色性(CD)光谱和差示扫描量热法(DSC)研究 TauD 及其酶-牛磺酸、酶-αKG 和酶-牛磺酸-αKG 复合物的热变性。
牛磺酸结合是吸热(+26kcal/mol)和熵驱动的,包括埋藏疏水面以关闭盖子结构域。αKG 的结合是焓有利的,并与牛磺酸结合表现出协同性,与αKG 结合相关的焓变(δΔH)从结合到 FeTauD 时的-30.1kcal/mol增加到结合到 FeTauD-牛磺酸复合物时的-65.2kcal/mol。
控制牛磺酸和 αKG 结合的分子间相互作用影响 TauD 及其复合物的整体稳定性,底物和辅因子之间具有明显而剧烈的协同性。
TauD 及其酶-牛磺酸、酶-αKG 和酶-牛磺酸-αKG 复合物的热变性都表现出比游离酶更高的温度稳定性。通过对所有研究物种的能量图谱进行解卷积,生成了一个热力学循环,显示出底物和辅因子结合之间具有显著的协同性,这进一步阐明了导致氧激活的事件。