Department of Epidemiology and Biostatistics, School of Public Health, Harbin Medical University, Harbin, 150086, P.R. China.
Department of Gynecology Oncology, the Tumor Hospital, Harbin Medical University, Harbin, 150086, P.R. China.
Sci Rep. 2017 Feb 22;7:43353. doi: 10.1038/srep43353.
Cervical cancer (CC) still remains a common and deadly malignancy among females in developing countries. More accurate and reliable diagnostic methods/biomarkers should be discovered. In this study, we performed a comprehensive analysis of metabolomics (285 samples) and transcriptomics (52 samples) on the potential diagnostic implication and metabolic characteristic description in cervical cancer. Sixty-two metabolites were different between CC and normal controls (NOR), in which 5 metabolites (bilirubin, LysoPC(17:0), n-oleoyl threonine, 12-hydroxydodecanoic acid and tetracosahexaenoic acid) were selected as candidate biomarkers for CC. The AUC value, sensitivity (SE), and specificity (SP) of these 5 biomarkers were 0.99, 0.98 and 0.99, respectively. We further analysed the genes in 7 significantly enriched pathways, of which 117 genes, that were expressed differentially, were mainly involved in catalytic activity. Finally, a fully connected network of metabolites and genes in these pathways was built, which can increase the credibility of our selected metabolites. In conclusion, our biomarkers from metabolomics could set a path for CC diagnosis and screening. Our results also showed that variables of both transcriptomics and metabolomics were associated with CC.
宫颈癌(CC)仍然是发展中国家女性中常见且致命的恶性肿瘤。应该发现更准确和可靠的诊断方法/生物标志物。在这项研究中,我们对代谢组学(285 个样本)和转录组学(52 个样本)进行了全面分析,以研究其在宫颈癌中的潜在诊断意义和代谢特征描述。62 种代谢物在 CC 和正常对照组(NOR)之间存在差异,其中 5 种代谢物(胆红素、LysoPC(17:0)、n-油酰苏氨酸、12-羟基十二烷酸和二十四碳六烯酸)被选为 CC 的候选生物标志物。这 5 种生物标志物的 AUC 值、敏感性(SE)和特异性(SP)分别为 0.99、0.98 和 0.99。我们进一步分析了 7 个显著富集途径中的基因,其中 117 个表达差异的基因主要参与催化活性。最后,构建了这些途径中代谢物和基因的全连接网络,这可以提高我们选择的代谢物的可信度。总之,我们从代谢组学中获得的生物标志物可以为 CC 的诊断和筛查开辟一条道路。我们的结果还表明,转录组学和代谢组学的变量都与 CC 相关。