Sena Lucia, Uversky Vladimir N
Department of Molecular Medicine, Morsani College of Medicine, University of South Florida , Tampa, FL, USA.
Department of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, USA; USF Health Byrd Alzheimer Research Institute, Morsani College of Medicine, University of South Florida, Tampa, FL, USA; Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia.
Intrinsically Disord Proteins. 2016 Dec 15;4(1):e1253526. doi: 10.1080/21690707.2016.1253526. eCollection 2016.
Green oceanic microalgae are efficient converters of solar energy into the biomass via the photosynthesis process, with the first step of carbon fixation in the photosynthesis being controlled by the enzyme ribulose-1, 5-bisphosphate carboxylase/oxygenase (RuBisCO), which is a large proteinaceous machine composed of large (L, 52 kDa) and small (S, 12 kDa) subunits arranged as a LS hexadecamer that catalyzes the formation of 2 phosphoglyceric acid molecules from one ribulose 1,5-bisphosphate (RuBP) molecule and one of carbon dioxide (CO) and that is considered as the most abundant protein on Earth. The catalytic efficiency of this protein is controlled by the RuBisCO activase (RCA) that interacts with RuBisCO and promotes the CO entrance to the active site of RuBisCO by removing RuBP. One of the peculiar features of RCA is the presence of functional disordered tails that might play a role in RCA-RuBisCO interaction. Based on their ability to move, microalgae are grouped into 2 major class, motile and non-motile. Motile microalgae have an obvious advantage over their non-motile counterparts because of their ability to actively migrate within the water column to find the most optimal environmental conditions. We hypothesizes that the RCA could be functionally different in the non-motile and motile microalgae. To check this hypothesis, we conducted a comparative computational analysis of the RCAs from the representatives of the non-motile () and motile ( sp. GSL018) green oceanic microalgae.
绿色海洋微藻是通过光合作用将太阳能高效转化为生物量的生物,光合作用中碳固定的第一步由核酮糖-1,5-二磷酸羧化酶/加氧酶(RuBisCO)控制,该酶是一种大型蛋白质机器,由大亚基(L,52 kDa)和小亚基(S,12 kDa)组成,排列成LS十六聚体,催化从一个核酮糖1,5-二磷酸(RuBP)分子和一个二氧化碳(CO)分子形成2个磷酸甘油酸分子,被认为是地球上最丰富的蛋白质。这种蛋白质的催化效率由RuBisCO活化酶(RCA)控制,RCA与RuBisCO相互作用,通过去除RuBP促进CO进入RuBisCO的活性位点。RCA的一个独特特征是存在功能性无序尾巴,这可能在RCA-RuBisCO相互作用中发挥作用。根据微藻的运动能力,它们被分为两大类,能动的和不能动的。能动微藻比不能动的微藻具有明显优势,因为它们能够在水柱中主动迁移以找到最适宜的环境条件。我们假设RCA在不能动和能动的微藻中功能可能不同。为了验证这一假设,我们对来自不能动的()和能动的(GSL018藻种)绿色海洋微藻的RCA进行了比较计算分析。