Einarsdottir Eydis, Magnusdottir Manuela, Astarita Giuseppe, Köck Matthias, Ögmundsdottir Helga M, Thorsteinsdottir Margret, Rapp Hans Tore, Omarsdottir Sesselja, Paglia Giuseppe
Faculty of Pharmaceutical Sciences, University of Iceland, Reykjavík 107, Iceland.
Center for Systems Biology, University of Iceland, Reykjavík 101, Iceland.
Mar Drugs. 2017 Feb 22;15(2):52. doi: 10.3390/md15020052.
Twenty-eight sponge specimens were collected at a shallow water hydrothermal vent site north of Iceland. Extracts were prepared and tested in vitro for cytotoxic activity, and eight of them were shown to be cytotoxic. A mass spectrometry (MS)-based metabolomics approach was used to determine the chemical composition of the extracts. This analysis highlighted clear differences in the metabolomes of three sponge specimens, and all of them were identified as (Bowerbank, 1866). Therefore, these specimens were selected for further investigation. metabolomes contained a class of potential key compounds, the 3-alkyl pyridine alkaloids (3-APA) responsible for the cytotoxic activity of the fractions. Several 3-APA compounds were tentatively identified including haliclamines, cyclostellettamines, viscosalines and viscosamines. Among these compounds, cyclostellettamine P was tentatively identified for the first time by using ion mobility MS in time-aligned parallel (TAP) fragmentation mode. In this work, we show the potential of applying metabolomics strategies and in particular the utility of coupling ion mobility with MS for the molecular characterization of sponge specimens.
在冰岛北部的一个浅水热液喷口处采集了28个海绵标本。制备提取物并在体外测试其细胞毒性活性,其中8个显示具有细胞毒性。采用基于质谱(MS)的代谢组学方法来确定提取物的化学成分。该分析突出了三个海绵标本代谢组的明显差异,并且所有标本都被鉴定为(鲍尔班克,1866年)。因此,选择这些标本进行进一步研究。代谢组包含一类潜在的关键化合物,即负责各馏分细胞毒性活性的3-烷基吡啶生物碱(3-APA)。初步鉴定了几种3-APA化合物,包括卤胺、环星胺、粘性碱和粘性胺。在这些化合物中,通过使用离子淌度MS的时间对齐平行(TAP)碎裂模式首次初步鉴定了环星胺P。在这项工作中,我们展示了应用代谢组学策略的潜力,特别是将离子淌度与MS联用对海绵标本进行分子表征的实用性。