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通过亚细胞定量蛋白质组学方法了解二穗短柄草籽粒发育过程中细胞壁的重塑

Understanding the Remodelling of Cell Walls during Brachypodium distachyon Grain Development through a Sub-Cellular Quantitative Proteomic Approach.

作者信息

Francin-Allami Mathilde, Lollier Virginie, Pavlovic Marija, San Clemente Hélène, Rogniaux Hélène, Jamet Elisabeth, Guillon Fabienne, Larré Colette

机构信息

UR1268 BIA (Biopolymères Interactions Assemblages), INRA, Nantes 44300, France.

Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24 Chemin de Borderouge-Auzeville, BP42617, Castanet-Tolosan 31326, France.

出版信息

Proteomes. 2016 Jun 24;4(3):21. doi: 10.3390/proteomes4030021.

Abstract

is a suitable plant model for studying temperate cereal crops, such as wheat, barley or rice, and helpful in the study of the grain cell wall. Indeed, the most abundant hemicelluloses that are in the cell wall of grain are (1-3)(1-4)-β-glucans and arabinoxylans, in a ratio similar to those of cereals such as barley or oat. Conversely, these cell walls contain few pectins and xyloglucans. Cell walls play an important role in grain physiology. The modifications of cell wall polysaccharides that occur during grain development and filling are key in the determination of the size and weight of the cereal grains. The mechanisms required for cell wall assembly and remodelling are poorly understood, especially in cereals. To provide a better understanding of these processes, we purified the cell wall at three developmental stages of the grain. The proteins were then extracted, and a quantitative and comparative LC-MS/MS analysis was performed to investigate the protein profile changes during grain development. Over 466 cell wall proteins (CWPs) were identified and classified according to their predicted functions. This work highlights the different proteome profiles that we could relate to the main phases of grain development and to the reorganization of cell wall polysaccharides that occurs during these different developmental stages. These results provide a good springboard to pursue functional validation to better understand the role of CWPs in the assembly and remodelling of the grain cell wall of cereals.

摘要

是研究温带谷类作物(如小麦、大麦或水稻)的合适植物模型,有助于谷物细胞壁的研究。事实上,谷物细胞壁中最丰富的半纤维素是(1-3)(1-4)-β-葡聚糖和阿拉伯木聚糖,其比例与大麦或燕麦等谷物相似。相反,这些细胞壁含有的果胶和木葡聚糖很少。细胞壁在谷物生理中起着重要作用。谷物发育和灌浆过程中发生的细胞壁多糖修饰是决定谷物大小和重量的关键。细胞壁组装和重塑所需的机制尚不清楚,尤其是在谷类作物中。为了更好地理解这些过程,我们在谷物的三个发育阶段纯化了细胞壁。然后提取蛋白质,并进行定量和比较性的液相色谱-串联质谱分析,以研究谷物发育过程中蛋白质谱的变化。鉴定出466种以上的细胞壁蛋白(CWP),并根据其预测功能进行分类。这项工作突出了不同的蛋白质组图谱,我们可以将其与谷物发育的主要阶段以及这些不同发育阶段中发生的细胞壁多糖重组联系起来。这些结果为进行功能验证提供了一个良好的起点,以便更好地理解CWP在谷类作物谷物细胞壁组装和重塑中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/10e7/5217356/feac0be72f92/proteomes-04-00021-g001.jpg

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