Bocharov Eduard V, Bragin Pavel E, Pavlov Konstantin V, Bocharova Olga V, Mineev Konstantin S, Polyansky Anton A, Volynsky Pavel E, Efremov Roman G, Arseniev Alexander S
Department of Structural Biology, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS , str. Miklukho-Maklaya 16/10, Moscow 117997, Russian Federation.
Department of Structural and Computational Biology, Max F. Perutz Laboratories, University of Vienna , Campus Vienna Biocenter 5, Vienna AT-1030, Austria.
Biochemistry. 2017 Mar 28;56(12):1697-1705. doi: 10.1021/acs.biochem.6b01085. Epub 2017 Mar 17.
The epidermal growth factor receptor (EGFR) family is an important class of receptor tyrosine kinases, mediating a variety of cellular responses in normal biological processes and in pathological states of multicellular organisms. Different modes of dimerization of the human EGFR transmembrane domain (TMD) in different membrane mimetics recently prompted us to propose a novel signal transduction mechanism based on protein-lipid interaction. However, the experimental evidence for it was originally obtained with slightly different TMD fragments used in the two different mimetics, compromising the validity of the comparison. To eliminate ambiguity, we determined the nuclear magnetic resonance (NMR) structure of the bicelle-incorporated dimer of the EGFR TMD fragment identical to the one previously used in micelles. The NMR results augmented by molecular dynamics simulations confirm the mutual influence of the TMD and lipid environment, as is required for the proposed lipid-mediated activation mechanism. They also reveal the possible functional relevance of a subtle interplay between the concurrent processes in the lipid and protein during signal transduction.
表皮生长因子受体(EGFR)家族是一类重要的受体酪氨酸激酶,在正常生物过程和多细胞生物体的病理状态中介导多种细胞反应。最近,在不同的膜模拟物中,人EGFR跨膜结构域(TMD)的不同二聚化模式促使我们提出一种基于蛋白质-脂质相互作用的新型信号转导机制。然而,最初获得的支持该机制的实验证据是在两种不同的模拟物中使用了略有不同的TMD片段,这影响了比较的有效性。为了消除歧义,我们确定了与先前用于胶束中的EGFR TMD片段相同的、掺入双分子层的二聚体的核磁共振(NMR)结构。分子动力学模拟增强的NMR结果证实了TMD与脂质环境的相互影响,这是所提出的脂质介导激活机制所必需的。它们还揭示了信号转导过程中脂质和蛋白质中并发过程之间微妙相互作用的可能功能相关性。