• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

静息态 fMRI 的独立成分图分析方法。

A method for independent component graph analysis of resting-state fMRI.

机构信息

Department of Physics & Astronomy Brain & Mind Institute Western University London ON Canada.

Coma Science Group GIGA Research Université et Centre Hospitalier Universitaire de Liège Liège Belgium.

出版信息

Brain Behav. 2017 Feb 16;7(3):e00626. doi: 10.1002/brb3.626. eCollection 2017 Mar.

DOI:10.1002/brb3.626
PMID:28293468
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5346515/
Abstract

INTRODUCTION

Independent component analysis (ICA) has been extensively used for reducing task-free BOLD fMRI recordings into spatial maps and their associated time-courses. The spatially identified independent components can be considered as intrinsic connectivity networks (ICNs) of non-contiguous regions. To date, the spatial patterns of the networks have been analyzed with techniques developed for volumetric data.

OBJECTIVE

Here, we detail a graph building technique that allows these ICNs to be analyzed with graph theory.

METHODS

First, ICA was performed at the single-subject level in 15 healthy volunteers using a 3T MRI scanner. The identification of nine networks was performed by a multiple-template matching procedure and a subsequent component classification based on the network "neuronal" properties. Second, for each of the identified networks, the nodes were defined as 1,015 anatomically parcellated regions. Third, between-node functional connectivity was established by building edge weights for each networks. Group-level graph analysis was finally performed for each network and compared to the classical network.

RESULTS

Network graph comparison between the classically constructed network and the nine networks showed significant differences in the auditory and visual medial networks with regard to the average degree and the number of edges, while the visual lateral network showed a significant difference in the small-worldness.

CONCLUSIONS

This novel approach permits us to take advantage of the well-recognized power of ICA in BOLD signal decomposition and, at the same time, to make use of well-established graph measures to evaluate connectivity differences. Moreover, by providing a graph for each separate network, it can offer the possibility to extract graph measures in a specific way for each network. This increased specificity could be relevant for studying pathological brain activity or altered states of consciousness as induced by anesthesia or sleep, where specific networks are known to be altered in different strength.

摘要

简介

独立成分分析(ICA)已被广泛应用于将无任务态 fMRI 记录数据简化为空间图谱及其相关时间序列。在空间上识别出的独立成分可以被视为非连续区域的内在连接网络(ICN)。迄今为止,这些网络的空间模式已经通过针对容积数据开发的技术进行了分析。

目的

本文详细介绍了一种图形构建技术,该技术允许使用图论对这些 ICN 进行分析。

方法

首先,我们在 15 名健康志愿者中使用 3T MRI 扫描仪在个体水平上进行 ICA。通过多模板匹配过程和基于网络“神经元”特性的后续成分分类来识别九个网络。其次,为每个识别出的网络定义节点为 1015 个解剖分割区域。第三,通过为每个网络构建边权重来建立节点间的功能连接。最后,对每个网络进行组水平的图形分析,并与经典网络进行比较。

结果

经典网络和九个网络之间的网络图形比较显示,在听觉和视觉内侧网络中,平均度数和边数存在显著差异,而在视觉外侧网络中,小世界程度存在显著差异。

结论

这种新方法使我们能够充分利用 ICA 在 BOLD 信号分解中的强大功能,同时利用成熟的图形度量标准来评估连接差异。此外,通过为每个单独的网络提供一个图形,它可以提供以特定方式为每个网络提取图形度量的可能性。这种增加的特异性可能与研究病理性脑活动或麻醉或睡眠引起的意识改变有关,在这些情况下,已知特定网络会以不同的强度发生改变。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/524ca22f011e/BRB3-7-e00626-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/cf043d2c63b3/BRB3-7-e00626-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/884d8e79b2d4/BRB3-7-e00626-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/28461f61a42e/BRB3-7-e00626-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/868d31bb9a1b/BRB3-7-e00626-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/dd20a7fc11d4/BRB3-7-e00626-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/1941b4f8dca7/BRB3-7-e00626-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/95d00b052c5e/BRB3-7-e00626-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/524ca22f011e/BRB3-7-e00626-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/cf043d2c63b3/BRB3-7-e00626-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/884d8e79b2d4/BRB3-7-e00626-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/28461f61a42e/BRB3-7-e00626-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/868d31bb9a1b/BRB3-7-e00626-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/dd20a7fc11d4/BRB3-7-e00626-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/1941b4f8dca7/BRB3-7-e00626-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/95d00b052c5e/BRB3-7-e00626-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba93/5346515/524ca22f011e/BRB3-7-e00626-g008.jpg

相似文献

1
A method for independent component graph analysis of resting-state fMRI.静息态 fMRI 的独立成分图分析方法。
Brain Behav. 2017 Feb 16;7(3):e00626. doi: 10.1002/brb3.626. eCollection 2017 Mar.
2
Effect of resting-state functional MR imaging duration on stability of graph theory metrics of brain network connectivity.静息态功能磁共振成像时长对脑网络连接图论度量稳定性的影响。
Radiology. 2011 May;259(2):516-24. doi: 10.1148/radiol.11101708. Epub 2011 Mar 15.
3
Multi-model order spatially constrained ICA reveals highly replicable group differences and consistent predictive results from resting data: A large N fMRI schizophrenia study.多模态顺序空间约束 ICA 揭示了高可重复的组间差异和来自静息态数据的一致预测结果:一项大样本 fMRI 精神分裂症研究。
Neuroimage Clin. 2023;38:103434. doi: 10.1016/j.nicl.2023.103434. Epub 2023 May 17.
4
Investigating univariate temporal patterns for intrinsic connectivity networks based on complexity and low-frequency oscillation: a test-retest reliability study.基于复杂性和低频振荡研究固有连接网络的单变量时间模式:重测信度研究。
Neuroscience. 2013 Dec 19;254:404-26. doi: 10.1016/j.neuroscience.2013.09.009. Epub 2013 Sep 13.
5
Multiple fMRI system-level baseline connectivity is disrupted in patients with consciousness alterations.意识改变患者的多个功能磁共振成像系统水平的基线连通性被破坏。
Cortex. 2014 Mar;52:35-46. doi: 10.1016/j.cortex.2013.11.005. Epub 2013 Nov 20.
6
Identifying patients with Alzheimer's disease using resting-state fMRI and graph theory.利用静息态功能磁共振成像和图论识别阿尔茨海默病患者。
Clin Neurophysiol. 2015 Nov;126(11):2132-41. doi: 10.1016/j.clinph.2015.02.060. Epub 2015 Apr 1.
7
Fully exploratory network ICA (FENICA) on resting-state fMRI data.静息态 fMRI 数据的全探索式网络独立成分分析(FENICA)。
J Neurosci Methods. 2010 Oct 15;192(2):207-13. doi: 10.1016/j.jneumeth.2010.07.028. Epub 2010 Aug 3.
8
Large-Scale Functional Brain Network Reorganization During Taoist Meditation.道家冥想期间大规模功能性脑网络重组
Brain Connect. 2016 Feb;6(1):9-24. doi: 10.1089/brain.2014.0318. Epub 2015 Oct 6.
9
Connectivity graph analysis of the auditory resting state network in tinnitus.耳鸣静息态网络的连通性图谱分析。
Brain Res. 2012 Nov 16;1485:10-21. doi: 10.1016/j.brainres.2012.05.006. Epub 2012 May 10.
10
A computational study of whole-brain connectivity in resting state and task fMRI.静息态和任务功能磁共振成像中全脑连接性的计算研究。
Med Sci Monit. 2014 Jun 20;20:1024-42. doi: 10.12659/MSM.891142.

引用本文的文献

1
Phenotyping Superagers Using Resting-State fMRI.利用静息态 fMRI 对超级老年人进行表型分析。
AJNR Am J Neuroradiol. 2023 Apr;44(4):424-433. doi: 10.3174/ajnr.A7820. Epub 2023 Mar 16.
2
Spindle-slow oscillation coupling correlates with memory performance and connectivity changes in a hippocampal network after sleep.纺锤波慢波同步与睡眠后海马网络的记忆表现和连接变化相关。
Hum Brain Mapp. 2022 Sep;43(13):3923-3943. doi: 10.1002/hbm.25893. Epub 2022 Apr 30.
3
The Locus Coeruleus- Norepinephrine System in Stress and Arousal: Unraveling Historical, Current, and Future Perspectives.

本文引用的文献

1
High-Dimensional ICA Analysis Detects Within-Network Functional Connectivity Damage of Default-Mode and Sensory-Motor Networks in Alzheimer's Disease.高维独立成分分析检测阿尔茨海默病默认模式和感觉运动网络内的功能连接损伤。
Front Hum Neurosci. 2015 Feb 3;9:43. doi: 10.3389/fnhum.2015.00043. eCollection 2015.
2
Multiple fMRI system-level baseline connectivity is disrupted in patients with consciousness alterations.意识改变患者的多个功能磁共振成像系统水平的基线连通性被破坏。
Cortex. 2014 Mar;52:35-46. doi: 10.1016/j.cortex.2013.11.005. Epub 2013 Nov 20.
3
Graph independent component analysis reveals repertoires of intrinsic network components in the human brain.
应激与觉醒中的蓝斑-去甲肾上腺素系统:解读历史、现状与未来展望
Front Psychiatry. 2021 Jan 27;11:601519. doi: 10.3389/fpsyt.2020.601519. eCollection 2020.
4
Altered Granger Causal Connectivity of Resting-State Neural Networks in Patients With Leukoaraiosis-Associated Cognitive Impairment-A Cross-Sectional Study.白质疏松症相关认知障碍患者静息态神经网络的格兰杰因果连接改变——一项横断面研究
Front Neurol. 2020 Jun 10;11:457. doi: 10.3389/fneur.2020.00457. eCollection 2020.
5
Reconfiguration of large-scale functional connectivity in patients with disorders of consciousness.意识障碍患者的大规模功能连接重配置。
Brain Behav. 2020 Jan;10(1):e1476. doi: 10.1002/brb3.1476. Epub 2019 Nov 26.
6
General Anesthesia: A Probe to Explore Consciousness.全身麻醉:探索意识的探针。
Front Syst Neurosci. 2019 Aug 14;13:36. doi: 10.3389/fnsys.2019.00036. eCollection 2019.
7
Revealing hemodynamic heterogeneity of gliomas based on signal profile features of dynamic susceptibility contrast-enhanced MRI.基于动态磁敏感对比增强 MRI 的信号谱特征揭示脑胶质瘤的血流动力学异质性。
Neuroimage Clin. 2019;23:101864. doi: 10.1016/j.nicl.2019.101864. Epub 2019 May 22.
8
Tinnitus distress: a paradoxical attention to the sound?耳鸣困扰:对声音的矛盾关注?
J Neurol. 2019 Sep;266(9):2197-2207. doi: 10.1007/s00415-019-09390-1. Epub 2019 May 31.
9
Multimodal Neuroimaging Approach to Variability of Functional Connectivity in Disorders of Consciousness: A PET/MRI Pilot Study.意识障碍中功能连接变异性的多模态神经影像学方法:一项PET/MRI初步研究
Front Neurol. 2018 Oct 18;9:861. doi: 10.3389/fneur.2018.00861. eCollection 2018.
10
Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome.维度在使用经典伊辛模型和基于结构连接组实现的伊辛模型预测大脑自发行为中的作用。
Brain Connect. 2018 Sep;8(7):444-455. doi: 10.1089/brain.2017.0516. Epub 2018 Sep 4.
图独立成分分析揭示了人类大脑内在网络成分的组成。
PLoS One. 2014 Jan 7;9(1):e82873. doi: 10.1371/journal.pone.0082873. eCollection 2014.
4
The connectome mapper: an open-source processing pipeline to map connectomes with MRI.连接组映射器:一种用于使用 MRI 映射连接组的开源处理管道。
PLoS One. 2012;7(12):e48121. doi: 10.1371/journal.pone.0048121. Epub 2012 Dec 18.
5
Connectivity graph analysis of the auditory resting state network in tinnitus.耳鸣静息态网络的连通性图谱分析。
Brain Res. 2012 Nov 16;1485:10-21. doi: 10.1016/j.brainres.2012.05.006. Epub 2012 May 10.
6
Auditory resting-state network connectivity in tinnitus: a functional MRI study.耳鸣的听觉静息态网络连接:一项功能磁共振成像研究。
PLoS One. 2012;7(5):e36222. doi: 10.1371/journal.pone.0036222. Epub 2012 May 4.
7
Mapping the human connectome at multiple scales with diffusion spectrum MRI.采用弥散频谱 MRI 技术在多个尺度上绘制人类连接组图谱。
J Neurosci Methods. 2012 Jan 30;203(2):386-97. doi: 10.1016/j.jneumeth.2011.09.031. Epub 2011 Oct 6.
8
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.Nipype:一个灵活、轻量级且可扩展的 Python 神经影像学数据处理框架。
Front Neuroinform. 2011 Aug 22;5:13. doi: 10.3389/fninf.2011.00013. eCollection 2011.
9
The connectome viewer toolkit: an open source framework to manage, analyze, and visualize connectomes.连接组学视图工具包:一个用于管理、分析和可视化连接组学的开源框架。
Front Neuroinform. 2011 Jun 6;5:3. doi: 10.3389/fninf.2011.00003. eCollection 2011.
10
Identifying the default-mode component in spatial IC analyses of patients with disorders of consciousness.在意识障碍患者的空间 IC 分析中识别默认模式成分。
Hum Brain Mapp. 2012 Apr;33(4):778-96. doi: 10.1002/hbm.21249. Epub 2011 Apr 11.